RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 ADAM18Q9Y3Q7 739 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 SDK2Q58EX2 2172 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 ZC3H12DA2A288 527 aaKnown RBP15.19■□□□□ 0.02
CTSA-207ENST00000484855 ANKUB1A6NFN9 424 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 SLC22A31A6NKX4 558 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 DLGAP3O95886 979 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 IGHEP01854 428 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 HIST1H1CP16403 213 aaKnown RBP15.19■□□□□ 0.02
CTSA-207ENST00000484855 SOX3P41225 446 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 RPS5P46782 204 aaKnown RBP15.19■□□□□ 0.02
CTSA-207ENST00000484855 WNT4P56705 351 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 MLLT11Q13015 90 aaPredicted RBP15.19■□□□□ 0.02
CTSA-207ENST00000484855 SSX1Q16384 188 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 ARMC4Q5T2S8 1044 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 BICRALQ6AI39 1079 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 SIRT6Q8N6T7 355 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 FAM98AQ8NCA5 519 aaKnown RBP15.19■□□□□ 0.02
CTSA-207ENST00000484855 PSD4Q8NDX1 1056 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 SDR9C7Q8NEX9 313 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 OR10G3Q8NGC4 313 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 OR52E2Q8NGJ4 325 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 OR51G2Q8NGK0 314 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 MOSPD2Q8NHP6 518 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 M1APQ8TC57 530 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 PTP4A1Q93096 173 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 TAAR8Q969N4 342 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 GPX7Q96SL4 187 aaPredicted RBP15.19■□□□□ 0.02
CTSA-207ENST00000484855 OR51E2Q9H255 320 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 OR51V1Q9H2C8 321 aa15.19■□□□□ 0.02
CTSA-207ENST00000484855 TMED7-TICAM2A0A0A6YYA0 188 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 NSG1A0A0A6YYJ2 146 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 SUSD5O60279 629 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 MT-CO3P00414 261 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 IGHA1P01876 353 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 ASAH2BP0C7U1 165 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TGFBR1P36897 503 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 AQP2P41181 271 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 SLC16A1P53985 500 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 SUMO3P55854 103 aaPredicted RBP15.18■□□□□ 0.02
CTSA-207ENST00000484855 LTBQ06643 244 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.18■□□□□ 0.02
CTSA-207ENST00000484855 DYNC1I2Q13409 638 aaKnown RBP15.18■□□□□ 0.02
CTSA-207ENST00000484855 NTRK2Q16620 822 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 B3GLCTQ6Y288 498 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TIPARPQ7Z3E1 657 aaKnown RBP15.18■□□□□ 0.02
CTSA-207ENST00000484855 SLC15A4Q8N697 577 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 OR11G2Q8NGC1 345 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 OR4K13Q8NH42 304 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TMEM234Q8WY98 164 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 KISS1RQ969F8 398 aaPredicted RBP15.18■□□□□ 0.02
CTSA-207ENST00000484855 SPACA9Q96E40 222 aaPredicted RBP15.18■□□□□ 0.02
CTSA-207ENST00000484855 METTL7AQ9H8H3 244 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 NRIP3Q9NQ35 241 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 KLHL1Q9NR64 748 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 ZNF229Q9UJW7 825 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TMED7Q9Y3B3 224 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TRAV36DV7A0A075B6V5 113 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 LOC100506127A0A0U1RQW1 187 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 CCDC182A6NF36 153 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 ITGA10O75578 1167 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 LIMS3P0CW19 117 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 LIMS4P0CW20 117 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TCN2P20062 427 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TMED1Q13445 227 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 TIMM50Q3ZCQ8 353 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 OR2G6Q5TZ20 316 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 NDUFAF7Q7L592 441 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 NANOGNBQ7Z5D8 188 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 LHFPL3Q86UP9 236 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 ATCAYQ86WG3 371 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 CT55Q8WUE5 264 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 ZHX1-C8orf76Q96EF9 292 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 SECISBP2Q96T21 854 aaKnown RBP15.18■□□□□ 0.02
CTSA-207ENST00000484855 KATNB1Q9BVA0 655 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 FKRPQ9H9S5 495 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 PPP4R1LQ9P1A2 415 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 PCDHGA3Q9Y5H0 932 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 EML6Q6ZMW3 1958 aa15.18■□□□□ 0.02
CTSA-207ENST00000484855 CACNA1HO95180 2353 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 CCDC187A0A096LP49 1063 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 TMEM72A0PK05 275 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 C9orf172C9J069 976 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 ARPC3O15145 178 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 WISP1O95388 367 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 HIST1H2ABP04908 130 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 CLUP10909 449 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 SLC2A5P22732 501 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 HTR3AP46098 478 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 RPS18P62269 152 aaKnown RBP15.17■□□□□ 0.02
CTSA-207ENST00000484855 ERVK-25P63136 954 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 ANKDD1AQ495B1 522 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 ALG10Q5BKT4 473 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 DHRS13Q6UX07 377 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 HIST3H2AQ7L7L0 130 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 TBC1D15Q8TC07 691 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 ST8SIA1Q92185 356 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 HIST1H2ACQ93077 130 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 CHCHD6Q9BRQ6 235 aa15.17■□□□□ 0.02
CTSA-207ENST00000484855 NDEL1Q9GZM8 345 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms