RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SPP2Q13103 211 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 SNTB2Q13425 540 aaKnown RBP1.73□□□□□ -2.13
SCAF11-207ENST00000484275 FRMPD2BQ6IN97 320 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 C11orf71Q6IPW1 123 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 OR52B4Q8NGK2 314 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 OR52P1PQ8NH57 321 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 DTX3LQ8TDB6 740 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 FGF11Q92914 225 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 SAMD8Q96LT4 415 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 HIST1H4GQ99525 98 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 RHBGQ9H310 441 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 ECT2Q9H8V3 914 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 B9D1Q9UPM9 204 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 TRAF3IP3Q9Y228 551 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 RFNGQ9Y644 331 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 ATP10DQ9P241 1426 aa1.73□□□□□ -2.13
SCAF11-207ENST00000484275 CLSPNQ9HAW4 1339 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 TRAV40A0A0B4J280 105 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 LANCL1O43813 399 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 RCBTB2O95199 551 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 IGLV2-23P01705 113 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 TDGF1P13385 188 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 TPSB2P20231 275 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 SHMT2P34897 504 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 TDGF1P3P51864 188 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 TPSAB1Q15661 275 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 CEBPEQ15744 281 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 BCL7AQ4VC05 210 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 PARP10Q53GL7 1025 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 BOLA3Q53S33 107 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 ZNF880Q6PDB4 577 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 CAMK2N1Q7Z7J9 78 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 TPRA1Q86W33 373 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 PCP2Q8IVA1 136 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 OR10G3Q8NGC4 313 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 PINX1Q96BK5 328 aaKnown RBP1.72□□□□□ -2.13
SCAF11-207ENST00000484275 AKR1E2Q96JD6 320 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 VPS35Q96QK1 796 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 CCNL2Q96S94 520 aaPredicted RBP1.72□□□□□ -2.13
SCAF11-207ENST00000484275 GSDMCQ9BYG8 508 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 SELENOIQ9C0D9 397 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 ROGDIQ9GZN7 287 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.72□□□□□ -2.138e-7■■□□□ 14.4
SCAF11-207ENST00000484275 HEBP2Q9Y5Z4 205 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 SHANK1Q9Y566 2161 aa1.72□□□□□ -2.13
SCAF11-207ENST00000484275 FRMPD4Q14CM0 1322 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 A0A1B0GUS0 222 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 E7ESA3 106 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 G3V4G9 280 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 DCTN6O00399 190 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 B4GALT5O43286 388 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 MBTPS2O43462 519 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 UGT2B17O75795 530 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 STAMBPO95630 424 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 MBD3O95983 291 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ADRA1AP35348 466 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 PTGDSP41222 190 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 DLX1P56177 255 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ENPEPQ07075 957 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 GAMTQ14353 236 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 PRSS8Q16651 343 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 TMEM183BQ1AE95 376 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 DNLZQ5SXM8 178 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 NIPAL3Q6P499 406 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 DPY19L4Q7Z388 723 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF571Q7Z3V5 609 aaPredicted RBP1.71□□□□□ -2.14
SCAF11-207ENST00000484275 PAQR7Q86WK9 346 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 TMEM183AQ8IXX5 376 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 KDM8Q8N371 416 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 FTMTQ8N4E7 242 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 FAM86B1Q8N7N1 296 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 CATSPER1Q8NEC5 780 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 TCTEX1D2Q8WW35 142 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ASB9Q96DX5 294 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 C12orf66Q96MD2 445 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 P2RY13Q9BPV8 354 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 CLMPQ9H6B4 373 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ATXN10Q9UBB4 475 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 CLCF1Q9UBD9 225 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF629Q9UEG4 869 aaPredicted RBP1.71□□□□□ -2.14
SCAF11-207ENST00000484275 STAP1Q9ULZ2 295 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 ALG6Q9Y672 507 aa1.71□□□□□ -2.14
SCAF11-207ENST00000484275 TUBGCP6Q96RT7 1819 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 AGPAT2O15120 278 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 MSH4O15457 936 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 SSX5O60225 188 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 ENTPD5O75356 428 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 PTBP3O95758 552 aaKnown RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 TLX1NBP0CAT3 122 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 POLR2EP19388 210 aaKnown RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 NPR2P20594 1047 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 NPY1RP25929 384 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 FGF9P31371 208 aaPredicted RBP1.7□□□□□ -2.14
SCAF11-207ENST00000484275 FMO3P31513 532 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 SPIBQ01892 262 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 GNMTQ14749 295 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 STK11Q15831 433 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 TRIM16LQ309B1 348 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 ZNF620Q6ZNG0 422 aa1.7□□□□□ -2.14
SCAF11-207ENST00000484275 CENPUQ71F23 418 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms