RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 GSTA1P08263 222 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 UROSP10746 265 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 BCKDHAP12694 445 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 DDX5P17844 614 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 GCAP28676 217 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 PGM1P36871 562 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 LIMS1P48059 325 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 PLAURQ03405 335 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 SPDYE7PQ495Y7 208 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 ELFN2Q5R3F8 820 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 LIPMQ5VYY2 423 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 SHISA2Q6UWI4 295 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 TIFABQ6ZNK6 161 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 FRMD7Q6ZUT3 714 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 EIF3MQ7L2H7 374 aaKnown RBP9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 AAED1Q7RTV5 226 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 GRINAQ7Z429 371 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 HMGN2P46Q86SG4 172 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 POMGNT2Q8NAT1 580 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 NUP37Q8NFH4 326 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 OR4F15Q8NGB8 312 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF563Q8TA94 476 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 PSMA8Q8TAA3 256 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 CKAP2Q8WWK9 683 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 TMEM45BQ96B21 275 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 MTERF3Q96E29 417 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 TUBB1Q9H4B7 451 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 OBP2BQ9NPH6 170 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 TMEM45AQ9NWC5 275 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 ATP6V1HQ9UI12 483 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 TRAPPC4Q9Y296 219 aa9.38□□□□□ -0.91
SMARCC1-205ENST00000483847 TMED7-TICAM2A0A0A6YYA0 188 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 ARPC4-TTLL3A0A0A6YYG9 625 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 TMEM72A0PK05 275 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 ZC3H12DA2A288 527 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 SLC28A1O00337 649 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 AP3D1O14617 1153 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 ANKRD28O15084 1053 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 SCAMP2O15127 329 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 PNPP00491 289 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 HPXP02790 462 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 KRT16P08779 473 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 LINC00032P0C843 101 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 GAAP10253 952 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 ARAFP10398 606 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 SAGP10523 405 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 ADRA2CP18825 462 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 COL8A2P25067 703 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 GPR6P46095 362 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 CLK1P49759 484 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 UBE2NP61088 152 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 LMO4P61968 165 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 SLC35A1P78382 337 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 PDCD2Q16342 344 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 MSMPQ1L6U9 139 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 GALNTL6Q49A17 601 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 EMBQ6PCB8 327 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 CLEC4FQ8N1N0 589 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 TMEM99Q8N816 258 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 OR9K2Q8NGE7 335 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 OR51F2Q8NH61 342 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 OR5P2Q8WZ92 322 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 MRPL24Q96A35 216 aaKnown RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 ALKBH3Q96Q83 286 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 JMJD8Q96S16 334 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 NAA11Q9BSU3 229 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 GIMAP2Q9UG22 337 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 FBXO9Q9UK97 447 aaPredicted RBP9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 TMED7Q9Y3B3 224 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 FIS1Q9Y3D6 152 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 NBEAL2Q6ZNJ1 2754 aa9.37□□□□□ -0.91
SMARCC1-205ENST00000483847 IGHV2OR16-5A0A0B4J2B6 119 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF503-AS2A6NEH8 195 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 CLDN24A6NM45 220 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 LSM1O15116 133 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 EIF1BO60739 113 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 STX11O75558 287 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 KRT33AO76009 404 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 AKR7A3O95154 331 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 IGKV3-15P01624 115 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 TCN1P20061 433 aaPredicted RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 HPCAL1P37235 193 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 IDH2P48735 452 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 SELENOPP49908 381 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 UBA52P62987 128 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 SNTB2Q13425 540 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 PTGR1Q14914 329 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 C3orf36Q3SXR2 165 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 OTUD3Q5T2D3 398 aaPredicted RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 PAQR6Q6TCH4 344 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 ZYG11AQ6WRX3 759 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 R3HCC1LQ7Z5L2 792 aaKnown RBP9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 LCA5Q86VQ0 697 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 SFXN5Q8TD22 340 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 YIPF5Q969M3 257 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 ZG16BQ96DA0 208 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 SUCNR1Q9BXA5 334 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 C1QTNF5Q9BXJ0 243 aa9.36□□□□□ -0.91
SMARCC1-205ENST00000483847 ZNF350Q9GZX5 532 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms