RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 C1orf52Q8N6N3 182 aaKnown RBP9.68□□□□□ -0.86
CCDC18-208ENST00000479653 NANPQ8TBE9 248 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 GPR151Q8TDV0 419 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 TAF15Q92804 592 aaKnown RBP eCLIP9.68□□□□□ -0.86
CCDC18-208ENST00000479653 KCNA7Q96RP8 456 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 TNFRSF12AQ9NP84 129 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 SLC35C2Q9NQQ7 365 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 SLC17A5Q9NRA2 495 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 DDX18Q9NVP1 670 aaKnown RBP9.68□□□□□ -0.86
CCDC18-208ENST00000479653 AMDHD2Q9Y303 409 aa9.68□□□□□ -0.86
CCDC18-208ENST00000479653 ARFGEF3Q5TH69 2177 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 TRAV20A0A0B4J274 112 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 NPIPB8E9PQR5 432 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 hCG_2039718K7EN88 272 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 UBDO15205 165 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 SLC22A2O15244 555 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 RSL1D1O76021 490 aaKnown RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 WNT11O96014 354 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 JUNP05412 331 aaKnown RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 ITGA5P08648 1049 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 GAAP10253 952 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 SAGP10523 405 aaPredicted RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 PRTN3P24158 256 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 EPHA3P29320 983 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 GPR6P46095 362 aaPredicted RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 NCBP2P52298 156 aaKnown RBP eCLIP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 PRPS1P60891 318 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 STX1BP61266 288 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 SLC25A3Q00325 362 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 EFNB3Q15768 340 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 ADRM1Q16186 407 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 SLC9B1Q4ZJI4 515 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 SPDYAQ5MJ70 313 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 OGFOD2Q6N063 350 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 KLHL24Q6TFL4 600 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 MAVSQ7Z434 540 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 C1QL2Q7Z5L3 287 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 CARM1Q86X55 608 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 OR52E4Q8NGH9 312 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 OR5B2Q96R09 309 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 WDR55Q9H6Y2 383 aaPredicted RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 DYNLRB1Q9NP97 96 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 SLC52A3Q9NQ40 469 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 FARSBQ9NSD9 589 aaKnown RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 EMC3Q9P0I2 261 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 VPS29Q9UBQ0 182 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 FBXO9Q9UK97 447 aaPredicted RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 C19orf53Q9UNZ5 99 aaPredicted RBP9.67□□□□□ -0.86
CCDC18-208ENST00000479653 TMED5Q9Y3A6 229 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 CORINQ9Y5Q5 1042 aa9.67□□□□□ -0.86
CCDC18-208ENST00000479653 VSTM5A8MXK1 200 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 UPK1AO00322 258 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 SCDO00767 359 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 WNT9BO14905 357 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 MRPL33O75394 65 aaKnown RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 PDYNP01213 254 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 CRYAAP02489 173 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 TFP02787 698 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 IDO1P14902 403 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 CDH2P19022 906 aaPredicted RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 NCF2P19878 526 aaPredicted RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 PRPH2P23942 346 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 GCH1P30793 250 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 EMX2Q04743 252 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 SRSF4Q08170 494 aaKnown RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 SF3A3Q12874 501 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 HEPACAMQ14CZ8 416 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 GSTA3Q16772 222 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 LSM12Q3MHD2 195 aaKnown RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 SPIN4Q56A73 249 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 ZNF311Q5JNZ3 666 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 MISPQ8IVT2 679 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 SIGLECL1Q8N7X8 197 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 RNF217Q8TC41 542 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 MRGPRX4Q96LA9 322 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 PPP1R36Q96LQ0 422 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 EBF4Q9BQW3 602 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 LMF2Q9BU23 707 aaKnown RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 MMP27Q9H306 513 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 TPK1Q9H3S4 243 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 TUBB1Q9H4B7 451 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 AKTIPQ9H8T0 292 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 EQTNQ9NQ60 294 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 TMEM45AQ9NWC5 275 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 C1orf109Q9NX04 203 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 PDP1Q9P0J1 537 aaPredicted RBP9.66□□□□□ -0.86
CCDC18-208ENST00000479653 UPB1Q9UBR1 384 aa9.66□□□□□ -0.86
CCDC18-208ENST00000479653 A0A087WV62 115 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 IGHV1-18A0A0C4DH31 117 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 GNG14A0A1W2PPG7 69 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 E9PBE3 544 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 LSM1O15116 133 aaKnown RBP9.65□□□□□ -0.86
CCDC18-208ENST00000479653 PEX11AO75192 247 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 SEC22BO75396 215 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 PRSS23O95084 383 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 ADRA2AP08913 450 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 ANPEPP15144 967 aa9.65□□□□□ -0.86
CCDC18-208ENST00000479653 MDKP21741 143 aaPredicted RBP9.65□□□□□ -0.86
CCDC18-208ENST00000479653 HTR6P50406 440 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms