RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 ESRP2Q9H6T0 727 aaKnown RBP12.7□□□□□ -0.38
ATG4B-218ENST00000479554 EMC3Q9P0I2 261 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 CHRNA9Q9UGM1 479 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 PRSS50Q9UI38 385 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 LIPT1Q9Y234 373 aa12.7□□□□□ -0.38
ATG4B-218ENST00000479554 TRIM64A6NGJ6 449 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 TRIM64BA6NI03 449 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 CLDN24A6NM45 220 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 MRASO14807 208 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
ATG4B-218ENST00000479554 ANGPT2O15123 496 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 LYZL6O75951 148 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 PMS2P2O95744 297 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 C1QCP02747 245 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 PAX1P15863 534 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 CDKN2CP42773 168 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 STK11Q15831 433 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 NCMAPQ5T1S8 102 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 CMIPQ8IY22 773 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF100Q8IYN0 542 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 CIARTQ8N365 385 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-218ENST00000479554 ANKFN1Q8N957 763 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 GLB1L3Q8NCI6 653 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-218ENST00000479554 SPDL1Q96EA4 605 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 INPP5KQ9BT40 448 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 SLC38A1Q9H2H9 487 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 HDGFL3Q9Y3E1 203 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 ARID1AO14497 2285 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 ZANQ9Y493 2812 aa12.69□□□□□ -0.38
ATG4B-218ENST00000479554 NAV3Q8IVL0 2385 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 IGKV3D-15A0A087WSY6 115 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 A0A1W2PP18 115 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 FBP2O00757 339 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 DNPH1O43598 174 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 GSNP06396 782 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 CHRM4P08173 479 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 COX5AP20674 150 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 EDNRAP25101 427 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 FKBP2P26885 142 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 IDH2P48735 452 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 POLR2JP52435 117 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 RPS4XP62701 263 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 PLAURQ03405 335 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 GNA13Q14344 377 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 ADAM5Q6NVV9 412 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 PGM2L1Q6PCE3 622 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 LRRC74BQ6ZQY2 392 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 PIGXQ8TBF5 258 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 PNPT1Q8TCS8 783 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 WDR60Q8WVS4 1066 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 FBXW5Q969U6 566 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 DNAJA3Q96EY1 480 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF701Q9NV72 531 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 GID8Q9NWU2 228 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 LAMP3Q9UQV4 416 aa12.68□□□□□ -0.38
ATG4B-218ENST00000479554 NOSIPQ9Y314 301 aaKnown RBP12.68□□□□□ -0.38
ATG4B-218ENST00000479554 ROS1P08922 2347 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 AGAP5A6NIR3 686 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 ZNF716A6NP11 495 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 RFXANKO14593 260 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 AP3D1O14617 1153 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 ADAM11O75078 769 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 CNOT4O95628 575 aaKnown RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 KRT75O95678 551 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 LY6G6DO95868 133 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 NR2F1P10589 423 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 UQCRBP14927 111 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 CCNA2P20248 432 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 RPS4Y1P22090 263 aaKnown RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 IGHV1-2P23083 117 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 HTR3AP46098 478 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 CLK1P49759 484 aaKnown RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 ATP5J2P56134 94 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 OR2B6P58173 313 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 PSME3P61289 254 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 BSPH1Q075Z2 132 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 PDK3Q15120 406 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 PPA1Q15181 289 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 COX20Q5RI15 118 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 SEZ6L2Q6UXD5 910 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 DNAJC14Q6Y2X3 702 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 ATG4DQ86TL0 474 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 UBE2J2Q8N2K1 259 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 KBTBD8Q8NFY9 601 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 MUCL1Q96DR8 90 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 CLPTM1LQ96KA5 538 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 OR11A1Q9GZK7 315 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 DENND2DQ9H6A0 471 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 SLC52A3Q9NQ40 469 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 SLC7A8Q9UHI5 535 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 LEF1Q9UJU2 399 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-218ENST00000479554 FREM1Q5H8C1 2179 aa12.67□□□□□ -0.38
ATG4B-218ENST00000479554 TMED7-TICAM2A0A0A6YYA0 188 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 GPR171O14626 319 aa12.66□□□□□ -0.38
ATG4B-218ENST00000479554 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms