RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-215	ENST00000478702	ATP8B1	O43520	1251 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	CYTIP	O60759	359 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	PRKD3	O94806	890 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	VIM	P08670	466 aa	Known RBP	14	□□□□□ -0.17
GARNL3-215	ENST00000478702	PRKAR1B	P31321	381 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	KCNJ5	P48544	419 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	MAP2K6	P52564	334 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	PPP2R2B	Q00005	443 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	CDK6	Q00534	326 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	KRTAP1-1	Q07627	177 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	SCARB2	Q14108	478 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	CAPRIN1	Q14444	709 aa	Known RBP	14	□□□□□ -0.17
GARNL3-215	ENST00000478702	EXOC3L2	Q2M3D2	409 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZNF311	Q5JNZ3	666 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	TMEM201	Q5SNT2	666 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	REEP3	Q6NUK4	255 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	TFAP2E	Q6VUC0	442 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	SERPINA11	Q86U17	422 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	LSR	Q86X29	649 aa	Predicted RBP	14	□□□□□ -0.17
GARNL3-215	ENST00000478702	TUSC5	Q8IXB3	177 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZC3HAV1L	Q96H79	300 aa	Known RBP	14	□□□□□ -0.17
GARNL3-215	ENST00000478702	ANKRD27	Q96NW4	1050 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	CGREF1	Q99674	301 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	REPIN1	Q9BWE0	567 aa	Known RBP	14	□□□□□ -0.17
GARNL3-215	ENST00000478702	ADAM19	Q9H013	955 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	ARMC7	Q9H6L4	198 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	C12orf49	Q9H741	205 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZNF232	Q9UNY5	417 aa		14	□□□□□ -0.17
GARNL3-215	ENST00000478702	MXRA5	Q9NR99	2828 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	C16orf97	H3BN30	126 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	YES1	P07947	543 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	PRG2	P13727	222 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	CCNA2	P20248	432 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	MDH1	P40925	334 aa	Known RBP	13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	MTPN	P58546	118 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	RASGEF1B	Q0VAM2	473 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	NFYC	Q13952	458 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	SELPLG	Q14242	412 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	ADRM1	Q16186	407 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	WBP2NL	Q6ICG8	309 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	DHRS4L2	Q6PKH6	230 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	BEND4	Q6ZU67	534 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	NUFIP2	Q7Z417	695 aa	Known RBP	13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	STK32C	Q86UX6	486 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	DDIT4L	Q96D03	193 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZHX1-C8orf76	Q96EF9	292 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZNF300	Q96RE9	604 aa	Predicted RBP	13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	KLHL14	Q9P2G3	628 aa		13.99	□□□□□ -0.17
GARNL3-215	ENST00000478702	YLPM1	P49750	1951 aa	Known RBP	13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	STAB1	Q9NY15	2570 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	IGKV3D-15	A0A087WSY6	115 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZC3H12D	A2A288	527 aa	Known RBP	13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZNF724	A8MTY0	619 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	FBP2	O00757	339 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	FRS3	O43559	492 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	PAX1	P15863	534 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	COPZ1	P61923	177 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	TRMT5	Q32P41	509 aa	Known RBP	13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	ANKRD34A	Q69YU3	496 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	STAC2	Q6ZMT1	411 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	NET1	Q7Z628	596 aa	Predicted RBP	13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	MTDH	Q86UE4	582 aa	Known RBP	13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	COMTD1	Q86VU5	262 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	KRT73	Q86Y46	540 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	PTOV1	Q86YD1	416 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	CADM2	Q8N3J6	435 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	HIPK4	Q8NE63	616 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	PIGX	Q8TBF5	258 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	C10orf82	Q8WW14	230 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	C3orf49	Q96BT1	292 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	DNAJA3	Q96EY1	480 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	SPATA5L1	Q9BVQ7	753 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	KLHL4	Q9C0H6	718 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	FANCF	Q9NPI8	374 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	SAR1A	Q9NR31	198 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	TMEM181	Q9P2C4	612 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	ANGPT4	Q9Y264	503 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	TRAPPC4	Q9Y296	219 aa		13.98	□□□□□ -0.17
GARNL3-215	ENST00000478702	ZNF716	A6NP11	495 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	BBIP1	A8MTZ0	92 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	TMEM229A	B2RXF0	380 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	FXYD1	O00168	92 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	GCM2	O75603	506 aa	Predicted RBP	13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	THBD	P07204	575 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	IMPDH2	P12268	514 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	PSMB1	P20618	241 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	SLC6A2	P23975	617 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	SLC16A1	P53985	500 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	PCBP3	P57721	371 aa	Known RBP	13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	RBBP4	Q09028	425 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	KLF10	Q13118	480 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	PDK3	Q15120	406 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	CYP51A1	Q16850	503 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	COQ5	Q5HYK3	327 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	GABRG1	Q8N1C3	465 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	C11orf65	Q8NCR3	313 aa		13.97	□□□□□ -0.17
GARNL3-215	ENST00000478702	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.96	□□□□□ -0.17

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