RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CHD5Q8TDI0 1954 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 ATG2BQ96BY7 2078 aa3.12□□□□□ -1.91
CDC42BPA-212ENST00000478573 MUC6Q6W4X9 2439 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 MUC22E2RYF6 1773 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRIM49BA6NDI0 452 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRABD2BA6NFA1 517 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 PP2D1A8MPX8 630 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 LOC730098B7Z3J9 87 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 B4GALT5O43286 388 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 KBTBD11O94819 623 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 ANP32DO95626 131 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 OPN1LWP04000 364 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 BCKDHAP12694 445 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 KRT13P13646 458 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 FOLR2P14207 255 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 KCNE1P15382 129 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 SYT1P21579 422 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR1G1P47890 313 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 UBE2V2Q15819 145 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 IL17AQ16552 155 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 MICAQ29983 383 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 CNPY1Q3B7I2 92 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 DCST2Q5T1A1 773 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 ATF7IP2Q5U623 682 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 NCR3LG1Q68D85 454 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 SULT1C3Q6IMI6 304 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 REG3GQ6UW15 175 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 GRAMD2AQ8IUY3 354 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 CD302Q8IX05 232 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMEM161BQ8NDZ6 487 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 VN1R2Q8NFZ6 395 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 THRSPQ92748 146 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRIM44Q96DX7 344 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 PIWIL1Q96J94 861 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF396Q96N95 335 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 RPP25Q9BUL9 199 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 COMMD4Q9H0A8 199 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC25A51Q9H1U9 297 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 PARVGQ9HBI0 331 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 IMPAD1Q9NX62 359 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 CLEC5AQ9NY25 188 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 RDH8Q9NYR8 311 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 CYTH4Q9UIA0 394 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMCC3Q9ULS5 477 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 BARX2Q9UMQ3 279 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 NTNG1Q9Y2I2 539 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 CLUHO75153 1309 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 ANKRD36A6QL64 1941 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 MUC3AQ02505 3323 aa3.11□□□□□ -1.91
CDC42BPA-212ENST00000478573 PI4KAP42356 2102 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 XIRP2A4UGR9 3374 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 ATRXP46100 2492 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PPIAL4CA0A0B4J2A2 164 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCDC169A6NNP5 214 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 HIDE1A8MVS5 230 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PPIHO43447 177 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRAPPC3O43617 180 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 FAM189A1O60320 539 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 VENTXO95231 258 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 JCHAINP01591 159 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 CSF2P04141 144 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PCCBP05166 539 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 CLTAP09496 248 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PPIAL4GP0DN37 164 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 EPB41P11171 864 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 DRD5P21918 477 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PSMA2P25787 234 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 OTX2P32243 289 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR1D4P47884 311 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 RPL34P49207 117 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 OSTNP61366 133 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 GTF2BQ00403 316 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 ABRAXAS2Q15018 415 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 LTB4RQ15722 352 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PSMD5Q16401 504 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PPP1R3AQ16821 1122 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC36A3Q495N2 470 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 TMEM31Q5JXX7 168 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 LGSNQ5TDP6 509 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 LIN9Q5TKA1 542 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 ALKAL1Q6UXT8 129 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 STAC2Q6ZMT1 411 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 ZNF600Q6ZNG1 722 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 CCDC73Q6ZRK6 1079 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PRSS48Q7RTY5 328 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 ANKRD37Q7Z713 158 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 ERICH1Q86X53 443 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 SLC22A18ASQ8N1D0 253 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 LINC00301Q8NCQ3 95 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR6T1Q8NGN1 323 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 OR2T34Q8NGX1 318 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 C4orf36Q96KX1 117 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 POMKQ9H5K3 350 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 EXOSC3Q9NQT5 275 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 UBQLN1Q9UMX0 589 aaKnown RBP3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 PRG3Q9Y2Y8 225 aaPredicted RBP3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 HES2Q9Y543 173 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 THADAQ6YHU6 1953 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 TRIOO75962 3097 aa3.1□□□□□ -1.91
CDC42BPA-212ENST00000478573 CACNA1HO95180 2353 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms