RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 EPS8Q12929 822 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 SYPL1Q16563 259 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 PDCD4Q53EL6 469 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 MUC15Q8N387 334 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 NEUROG1Q92886 237 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 TMEM45BQ96B21 275 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 MUS81Q96NY9 551 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 RAD21L1Q9H4I0 556 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 OBP2BQ9NPH6 170 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 NPAP1Q9NZP6 1156 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 RAB21Q9UL25 225 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 ZNF232Q9UNY5 417 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 FLVCR1Q9Y5Y0 555 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC25A15Q9Y619 301 aa12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 FN1P02751 2386 aaKnown RBP12.72□□□□□ -0.37
SMARCE1-209ENST00000478349 TMEM120BA0PK00 339 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 TMEM72A0PK05 275 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 CLDN24A6NM45 220 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 AP3D1O14617 1153 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 RAMP1O60894 148 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 BCAS1O75363 584 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 CRLF1O75462 422 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 IFNA2P01563 188 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 CSF3P09919 207 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 ZCCHC18P0CG32 403 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 NCF2P19878 526 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 GTF2E2P29084 291 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 EPHA3P29320 983 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 MPGP29372 298 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 PRPS1P60891 318 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 SLC17A1Q14916 467 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 RAB35Q15286 201 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 GABRA6Q16445 453 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 TNFAIP8L3Q5GJ75 292 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 OTUD3Q5T2D3 398 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 RNF220Q5VTB9 566 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 WBP2NLQ6ICG8 309 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 HMGN2P46Q86SG4 172 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 ATG4DQ86TL0 474 aaPredicted RBP12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 CCDC103Q8IW40 242 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 OR52P1PQ8NH57 321 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 PNPT1Q8TCS8 783 aaKnown RBP12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 ZG16BQ96DA0 208 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 ITCHQ96J02 903 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 INPP5KQ9BT40 448 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 AMBRA1Q9C0C7 1298 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 IFT52Q9Y366 437 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 GPR45Q9Y5Y3 372 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 JMJD1CQ15652 2540 aa12.71□□□□□ -0.37
SMARCE1-209ENST00000478349 PCNX3Q9H6A9 2034 aa12.71□□□□□ -0.38
SMARCE1-209ENST00000478349 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 A8MVM7 634 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 H7C417 338 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 CD5LO43866 347 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 SSX4O60224 188 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 ERLIN1O75477 346 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 BCHEP06276 602 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 GSNP06396 782 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 THBS1P07996 1170 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 EDNRAP25101 427 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 FABP6P51161 128 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 SLC18A1P54219 525 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 DSTNP60981 165 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 STX1BP61266 288 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 C6orf10Q5SRN2 563 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 TMEM225Q6GV28 225 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 AAED1Q7RTV5 226 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 CADM2Q8N3J6 435 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 DNAJA3Q96EY1 480 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 TEX37Q96LM6 180 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 CACNG6Q9BXT2 260 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 WDR55Q9H6Y2 383 aaPredicted RBP12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 SLC17A5Q9NRA2 495 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 B3GALT5Q9Y2C3 310 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 PMF1-BGLAPU3KQ54 211 aa12.7□□□□□ -0.38
SMARCE1-209ENST00000478349 TLN2Q9Y4G6 2542 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 USF3Q68DE3 2245 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 DSPPQ9NZW4 1301 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 A0A0G2JPF8 293 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 PRAMEF27A3QJZ7 478 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 LIPT2A6NK58 231 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 AQP7P3A6NL99 342 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 HNRNPCL2B2RXH8 293 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 HNRNPCL3B7ZW38 293 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 ZNF587BE7ETH6 402 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 UBDO15205 165 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 HNRNPCL1O60812 293 aaKnown RBP12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 ADAM11O75078 769 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 SNNO75324 88 aaPredicted RBP12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 AHSA1O95433 338 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 ITGA5P08648 1049 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 HNRNPCL4P0DMR1 293 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 KITP10721 976 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 SLC25A16P16260 332 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 CDKN2CP42773 168 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 MPP2Q14168 576 aa12.69□□□□□ -0.38
SMARCE1-209ENST00000478349 OR7A5Q15622 319 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms