RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 FLVCR1-AS1Q8TAF5 88 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 SLC22A8Q8TCC7 542 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 HEXDCQ8WVB3 486 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 ZNRF4Q8WWF5 429 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 TFGQ92734 400 aaPredicted RBP3.82□□□□□ -1.8
VPS50-214ENST00000477935 ANKRD9Q96BM1 317 aaPredicted RBP3.82□□□□□ -1.8
VPS50-214ENST00000477935 RMDN2Q96LZ7 410 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 TNFRSF13CQ96RJ3 184 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 LPAR4Q99677 370 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 NPAS2Q99743 824 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 DGCR6LQ9BY27 220 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 ANGPTL4Q9BY76 406 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 CLSTN2Q9H4D0 955 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 TRABDQ9H4I3 376 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 DHX35Q9H5Z1 703 aaKnown RBP3.82□□□□□ -1.8
VPS50-214ENST00000477935 ZWILCHQ9H900 591 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 CNOT10Q9H9A5 744 aaKnown RBP3.82□□□□□ -1.8
VPS50-214ENST00000477935 VPS37BQ9H9H4 285 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS50-214ENST00000477935 RMND1Q9NWS8 449 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 DNAJC12Q9UKB3 198 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 RNF150Q9ULK6 438 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 VWFP04275 2813 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 ROS1P08922 2347 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 CADP27708 2225 aa3.82□□□□□ -1.8
VPS50-214ENST00000477935 CPAMD8Q8IZJ3 1885 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 SIGLEC16A6NMB1 481 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 DEFB108AA8MXU0 73 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 TRIM77I1YAP6 450 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 TXNDC9O14530 226 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ARPC2O15144 300 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 SHOX2O60902 331 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 RALBP11234 206 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 MAGP20916 626 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 CRYGSP22914 178 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 PBLDP30039 288 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 RFC3P40938 356 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 PPP1R2P41236 205 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ADARP55265 1226 aaKnown RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 GSCP56915 257 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 MLF1P58340 268 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 RPS4XP62701 263 aaKnown RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 PLGLB1Q02325 96 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ACTN3Q08043 901 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 LOXL1Q08397 574 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 PTK6Q13882 451 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 SLC1A5Q15758 541 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 FASTKD1Q53R41 847 aaKnown RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 C2CD6Q53TS8 623 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 UGT3A1Q6NUS8 523 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 SUSD1Q6UWL2 747 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 GBP6Q6ZN66 633 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 Q6ZRP5 223 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 DNM1P46Q6ZS02 220 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ABHD13Q7L211 337 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 SLC26A11Q86WA9 606 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ZNF677Q86XU0 584 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 TBC1D21Q8IYX1 336 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 NPWQ8N729 165 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 JOSD2Q8TAC2 188 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ERP27Q96DN0 273 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 RBM24Q9BX46 236 aaKnown RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 OR52A5Q9H2C5 316 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 XKR8Q9H6D3 395 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 UGT1A7Q9HAW7 530 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 UGT1A8Q9HAW9 530 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 IL26Q9NPH9 171 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 MAN2C1Q9NTJ4 1040 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 RBM22Q9NW64 420 aaKnown RBP eCLIP3.81□□□□□ -1.8
VPS50-214ENST00000477935 SMOXQ9NWM0 555 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 C6orf203Q9P0P8 240 aaPredicted RBP3.81□□□□□ -1.8
VPS50-214ENST00000477935 PPP1R3CQ9UQK1 317 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 DSCAMO60469 2012 aa3.81□□□□□ -1.8
VPS50-214ENST00000477935 ZNF407Q9C0G0 2248 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 TRGV5A0A0B4J1U4 118 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 IGHV3-20A0A0C4DH32 117 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 GLYATL1P3A0A0U1RQE8 302 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 C15orf61A6NNL5 157 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 HMGB1P1B2RPK0 211 aaPredicted RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 EEF1E1-BLOC1S5C9J1V9 151 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 E9PQ18 207 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 H0YIG0 161 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PSMA7O14818 248 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 EEF1E1O43324 174 aaKnown RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 GPRIN2O60269 458 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PLOD3O60568 738 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 GLSO94925 669 aaPredicted RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 AP2A1O95782 977 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 SLC2A2P11168 524 aaPredicted RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 SYT1P21579 422 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 IL10P22301 178 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 CMA1P23946 247 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 AZGP1P25311 298 aaKnown RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 ZNF136P52737 540 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 ACTG1P63261 375 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PLOD1Q02809 727 aaPredicted RBP3.8□□□□□ -1.8
VPS50-214ENST00000477935 FAM53BQ14153 422 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 RASA2Q15283 850 aa3.8□□□□□ -1.8
VPS50-214ENST00000477935 PHKG1Q16816 387 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms