RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 RBM4Q9BWF3 364 aaKnown RBP8.83□□□□□ -1
NIFK-205ENST00000477693 SLC19A3Q9BZV2 496 aa8.83□□□□□ -1
NIFK-205ENST00000477693 NTN4Q9HB63 628 aa8.83□□□□□ -1
NIFK-205ENST00000477693 ACER3Q9NUN7 267 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RLIMQ9NVW2 624 aa8.83□□□□□ -1
NIFK-205ENST00000477693 DNAJB12Q9NXW2 375 aaKnown RBP8.83□□□□□ -1
NIFK-205ENST00000477693 ALKBH4Q9NXW9 302 aa8.83□□□□□ -1
NIFK-205ENST00000477693 COQ3Q9NZJ6 369 aa8.83□□□□□ -1
NIFK-205ENST00000477693 NKX1-2Q9UD57 310 aaPredicted RBP8.83□□□□□ -1
NIFK-205ENST00000477693 CAMK2AQ9UQM7 478 aa8.83□□□□□ -1
NIFK-205ENST00000477693 RPH3AQ9Y2J0 694 aaPredicted RBP8.83□□□□□ -1
NIFK-205ENST00000477693 CHST2Q9Y4C5 530 aa8.83□□□□□ -1
NIFK-205ENST00000477693 C2CD3Q4AC94 2353 aa8.83□□□□□ -1
NIFK-205ENST00000477693 CENPVL1A0A0U1RR11 272 aa8.82□□□□□ -1
NIFK-205ENST00000477693 OR2M5A3KFT3 312 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CD8B2A6NJW9 211 aa8.82□□□□□ -1
NIFK-205ENST00000477693 HCRTR2O43614 444 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CLDN14O95500 239 aa8.82□□□□□ -1
NIFK-205ENST00000477693 PEPDP12955 493 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ZNF23P17027 643 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CDH2P19022 906 aaPredicted RBP8.82□□□□□ -1
NIFK-205ENST00000477693 CHRNB4P30926 498 aa8.82□□□□□ -1
NIFK-205ENST00000477693 TIMP3P35625 211 aa8.82□□□□□ -1
NIFK-205ENST00000477693 SLC1A3P43003 542 aa8.82□□□□□ -1
NIFK-205ENST00000477693 LIMS1P48059 325 aa8.82□□□□□ -1
NIFK-205ENST00000477693 STARP49675 285 aa8.82□□□□□ -1
NIFK-205ENST00000477693 P2RX1P51575 399 aa8.82□□□□□ -1
NIFK-205ENST00000477693 RPS6KA3P51812 740 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ZNF41P51814 821 aaPredicted RBP8.82□□□□□ -1
NIFK-205ENST00000477693 ZNF136P52737 540 aa8.82□□□□□ -1
NIFK-205ENST00000477693 DLX5P56178 289 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CLDN18P56856 261 aa8.82□□□□□ -1
NIFK-205ENST00000477693 COX10Q12887 443 aa8.82□□□□□ -1
NIFK-205ENST00000477693 SKP2Q13309 424 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CDSNQ15517 529 aa8.82□□□□□ -1
NIFK-205ENST00000477693 MICAQ29983 383 aa8.82□□□□□ -1
NIFK-205ENST00000477693 PLPPR5Q32ZL2 321 aa8.82□□□□□ -1
NIFK-205ENST00000477693 WBP2NLQ6ICG8 309 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CBLN3Q6UW01 205 aa8.82□□□□□ -1
NIFK-205ENST00000477693 C5orf46Q6UWT4 87 aa8.82□□□□□ -1
NIFK-205ENST00000477693 SEM1Q6ZVN7 128 aa8.82□□□□□ -1
NIFK-205ENST00000477693 AMIGO2Q86SJ2 522 aa8.82□□□□□ -1
NIFK-205ENST00000477693 GTPBP8Q8N3Z3 284 aaPredicted RBP8.82□□□□□ -1
NIFK-205ENST00000477693 VANGL1Q8TAA9 524 aaPredicted RBP8.82□□□□□ -1
NIFK-205ENST00000477693 ADAMTS16Q8TE57 1224 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CA5BP1Q8WTZ4 195 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ASB5Q8WWX0 329 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ST8SIA1Q92185 356 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CNOT9Q92600 299 aaKnown RBP8.82□□□□□ -1
NIFK-205ENST00000477693 ZBTB8AQ96BR9 441 aa8.82□□□□□ -1
NIFK-205ENST00000477693 SH3YL1Q96HL8 342 aaPredicted RBP8.82□□□□□ -1
NIFK-205ENST00000477693 ALPK1Q96QP1 1244 aa8.82□□□□□ -1
NIFK-205ENST00000477693 GABARAPL1Q9H0R8 117 aa8.82□□□□□ -1
NIFK-205ENST00000477693 CALHM2Q9HA72 323 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ZNF556Q9HAH1 456 aa8.82□□□□□ -1
NIFK-205ENST00000477693 MED17Q9NVC6 651 aa8.82□□□□□ -1
NIFK-205ENST00000477693 USE1Q9NZ43 259 aa8.82□□□□□ -1
NIFK-205ENST00000477693 RPS6KB2Q9UBS0 482 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ICAM5Q9UMF0 924 aa8.82□□□□□ -1
NIFK-205ENST00000477693 OAZ3Q9UMX2 235 aa8.82□□□□□ -1
NIFK-205ENST00000477693 A4GNTQ9UNA3 340 aa8.82□□□□□ -1
NIFK-205ENST00000477693 RNF6Q9Y252 685 aa8.82□□□□□ -1
NIFK-205ENST00000477693 VDAC3Q9Y277 283 aa8.82□□□□□ -1
NIFK-205ENST00000477693 ORC6Q9Y5N6 252 aa8.82□□□□□ -1
NIFK-205ENST00000477693 LYVE1Q9Y5Y7 322 aa8.82□□□□□ -1
NIFK-205ENST00000477693 AP4B1Q9Y6B7 739 aa8.82□□□□□ -1
NIFK-205ENST00000477693 DNAJC13O75165 2243 aa8.81□□□□□ -1
NIFK-205ENST00000477693 ITPR2Q14571 2701 aa8.81□□□□□ -1
NIFK-205ENST00000477693 A0A0G2JNJ9 132 aa8.81□□□□□ -1
NIFK-205ENST00000477693 MBD3L4A6NDZ8 208 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 MBD3L3A6NE82 208 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 MBD3L5A6NJ08 208 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 KDM4EB2RXH2 506 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 M0R3H8 397 aa8.81□□□□□ -1
NIFK-205ENST00000477693 CHP2O43745 196 aa8.81□□□□□ -1
NIFK-205ENST00000477693 GMFGO60234 142 aa8.81□□□□□ -1
NIFK-205ENST00000477693 TOXO94900 526 aa8.81□□□□□ -1
NIFK-205ENST00000477693 UBTFL6P0CB48 400 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 POU3F2P20265 443 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 TCEA1P23193 301 aaKnown RBP8.81□□□□□ -1
NIFK-205ENST00000477693 ELK4P28324 431 aa8.81□□□□□ -1
NIFK-205ENST00000477693 ADH6P28332 368 aa8.81□□□□□ -1
NIFK-205ENST00000477693 CEACAM8P31997 349 aaPredicted RBP8.81□□□□□ -1
NIFK-205ENST00000477693 EIF1P41567 113 aaKnown RBP8.81□□□□□ -1
NIFK-205ENST00000477693 ACAA2P42765 397 aaKnown RBP8.81□□□□□ -1
NIFK-205ENST00000477693 ALDH3A2P51648 485 aa8.81□□□□□ -1
NIFK-205ENST00000477693 RAD23AP54725 363 aa8.81□□□□□ -1
NIFK-205ENST00000477693 CDH12P55289 794 aa8.81□□□□□ -1
NIFK-205ENST00000477693 SESN3P58005 492 aa8.81□□□□□ -1
NIFK-205ENST00000477693 SPIBQ01892 262 aa8.81□□□□□ -1
NIFK-205ENST00000477693 OR1Q1Q15612 314 aa8.81□□□□□ -1
NIFK-205ENST00000477693 NPTX1Q15818 432 aa8.81□□□□□ -1
NIFK-205ENST00000477693 ENTPD8Q5MY95 495 aa8.81□□□□□ -1
NIFK-205ENST00000477693 HMBOX1Q6NT76 420 aa8.81□□□□□ -1
NIFK-205ENST00000477693 DEF8Q6ZN54 512 aa8.81□□□□□ -1
NIFK-205ENST00000477693 PLEKHM3Q6ZWE6 761 aa8.81□□□□□ -1
NIFK-205ENST00000477693 OLIG3Q7RTU3 272 aa8.81□□□□□ -1
NIFK-205ENST00000477693 TSEN54Q7Z6J9 526 aaKnown RBP8.81□□□□□ -1
NIFK-205ENST00000477693 STK32CQ86UX6 486 aa8.81□□□□□ -1
NIFK-205ENST00000477693 CDK20Q8IZL9 346 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms