RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 WFDC6Q9BQY6 131 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 BTBD10Q9BSF8 475 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 NAA11Q9BSU3 229 aaPredicted RBP11.75□□□□□ -0.53
TOP3A-205ENST00000477508 TMEM43Q9BTV4 400 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 TAPBPLQ9BX59 468 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 OR11A1Q9GZK7 315 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 PIGMQ9H3S5 423 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 ACTR3BQ9P1U1 418 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 KLHL9Q9P2J3 617 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
TOP3A-205ENST00000477508 USP9YO00507 2555 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-205ENST00000477508 INTS1Q8N201 2190 aaKnown RBP11.74□□□□□ -0.53
TOP3A-205ENST00000477508 KDM4EB2RXH2 506 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-205ENST00000477508 NPIPB7O75200 414 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 AQP8O94778 261 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 PRKD3O94806 890 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 OR5F1O95221 314 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 AHSA1O95433 338 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 STAMBPO95630 424 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 OR1E2P47887 323 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 OR2B6P58173 313 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 TAS2R41P59536 307 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 MFSD13AQ14CX5 517 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 MTX3Q5HYI7 312 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 C1orf140Q5VVS0 124 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 FCRLAQ7L513 359 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 FAM214BQ7L5A3 538 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 MAMDC2Q7Z304 686 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-205ENST00000477508 RBM45Q8IUH3 476 aaKnown RBP11.74□□□□□ -0.53
TOP3A-205ENST00000477508 FAM156AQ8NDB6 213 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 OR6S1Q8NH40 331 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 MFSD8Q8NHS3 518 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 RNF217Q8TC41 542 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
TOP3A-205ENST00000477508 THTPAQ9BU02 230 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 PRR14Q9BWN1 585 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 SRXN1Q9BYN0 137 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 SLC19A3Q9BZV2 496 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 CHST11Q9NPF2 352 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 PACSIN3Q9UKS6 424 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 EMC9Q9Y3B6 208 aa11.74□□□□□ -0.53
TOP3A-205ENST00000477508 TRAV36DV7A0A075B6V5 113 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 A0A1W2PNV4 684 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 ZC3H12DA2A288 527 aaKnown RBP11.73□□□□□ -0.53
TOP3A-205ENST00000477508 LIPT2A6NK58 231 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 CPSF4LA6NMK7 179 aaKnown RBP11.73□□□□□ -0.53
TOP3A-205ENST00000477508 ARPC2O15144 300 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 CYTIPO60759 359 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 SS18L1O75177 396 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-205ENST00000477508 MPDZO75970 2070 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 RNF224P0DH78 156 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 FPR1P21462 350 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 BMP5P22003 454 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 CTBP2P56545 445 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 H3F3AP84243 136 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 ST3GAL3Q11203 375 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 TRIM25Q14258 630 aaKnown RBP11.73□□□□□ -0.53
TOP3A-205ENST00000477508 PDK3Q15120 406 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 PAQR6Q6TCH4 344 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 LINC00114Q6XXX2 140 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 DEF8Q6ZN54 512 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 VTCN1Q7Z7D3 282 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 CYP4Z1Q86W10 505 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 GCNT2Q8N0V5 402 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 NAXEQ8NCW5 288 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 PIGXQ8TBF5 258 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 ROBO4Q8WZ75 1007 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 SLC41A3Q96GZ6 507 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 PYURFQ96I23 114 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 HSH2DQ96JZ2 352 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 PRRC1Q96M27 445 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 HS6ST2Q96MM7 605 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 RIMS3Q9UJD0 308 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 FOXD3Q9UJU5 478 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-205ENST00000477508 FAM32AQ9Y421 112 aaKnown RBP11.73□□□□□ -0.53
TOP3A-205ENST00000477508 COL12A1Q99715 3063 aa11.73□□□□□ -0.53
TOP3A-205ENST00000477508 KIAA1549Q9HCM3 1950 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 HTR3EA5X5Y0 456 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 GPR171O14626 319 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 MSTNO14793 375 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 TNFSF13O75888 250 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 DNAJC8O75937 253 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 VAMP5O95183 116 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 YES1P07947 543 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 IMPDH2P12268 514 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 ITGA2P17301 1181 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 TNFRSF1BP20333 461 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 GTF2E2P29084 291 aaKnown RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 ASCL1P50553 236 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 RASGEF1BQ0VAM2 473 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 TRAP1Q12931 704 aaKnown RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 FOXF2Q12947 444 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 GUSBP1Q15486 140 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 TMEM201Q5SNT2 666 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 FAM69AQ5T7M9 428 aa11.72□□□□□ -0.53
TOP3A-205ENST00000477508 TTC33Q6PID6 262 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-205ENST00000477508 DHFR2Q86XF0 187 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms