RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SERINC4A6NH21 518 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 KDM4EB2RXH2 506 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SELENOFO60613 162 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 PLATP00750 562 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 KLK3P07288 261 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 MAPK3P27361 379 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 HOXD12P35452 270 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 MVDP53602 400 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 OR10A3P58181 314 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 PSPHP78330 225 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 P2RY14Q15391 338 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 RCBTB1Q8NDN9 531 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 OR4C15Q8NGM1 316 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ALG12Q9BV10 488 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 DPCDQ9BVM2 203 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 BAIAP2Q9UQB8 552 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 TLX3O43711 291 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 GALR3O60755 368 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 KCNK2O95069 426 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 HTR2BP41595 481 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 MAGEA8P43361 318 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SRP9P49458 86 aaKnown RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SGCAQ16586 387 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 FXNQ16595 210 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ATAD3CQ5T2N8 411 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 FAM205BPQ63HN1 556 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM92Q6UXU6 159 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 BTN2A1Q7KYR7 527 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 MAMDC2Q7Z304 686 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 WDR34Q96EX3 536 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ULBP3Q9BZM4 244 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 OR2B2Q9GZK3 357 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 DUSP22Q9NRW4 184 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SLC6A5Q9Y345 797 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 WDR90Q96KV7 1748 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 NYNRINQ9P2P1 1898 aaKnown RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ABCA7Q8IZY2 2146 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SRPX2O60687 465 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 FZD7O75084 574 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 HCKP08631 526 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 UCHL1P09936 223 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 H2BFMP0C1H6 154 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SBK2P0C263 348 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ANXA3P12429 323 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 TGFBR2P37173 567 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 PRPS1P60891 318 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 C1orf53Q5VUE5 145 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 KIAA1958Q8N8K9 716 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 OR4Q3Q8NH05 313 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 FAM46BQ96A09 425 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SLC25A46Q96AG3 418 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF775Q96BV0 537 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SHDQ96IW2 340 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 LPAR4Q99677 370 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 ING1Q9UK53 422 aaPredicted RBP10.18□□□□□ -0.78
COL27A1-204ENST00000477421 DHDHQ9UQ10 334 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 SBF1O95248 1867 aa10.18□□□□□ -0.78
COL27A1-204ENST00000477421 A0A1W2PPV9 198 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 DSCR3O14972 297 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 ZNF264O43296 627 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 LILRB5O75023 590 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 IGHA2P01877 340 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 APEHP13798 732 aaKnown RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 HIST1H1CP16403 213 aaKnown RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 PTH2RP49190 550 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 OR1D5P58170 312 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 FXYD6P3P58550 94 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 SIRPAP78324 504 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 WDR45BQ5MNZ6 344 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 LAIR2Q6ISS4 152 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 PYHIN1Q6K0P9 492 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 SFXN4Q6P4A7 337 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 CLDN22Q8N7P3 220 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 OR8D4Q8NGM9 314 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 BAHD1Q8TBE0 780 aaPredicted RBP10.17□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM234Q8WY98 164 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NXPE2Q96DL1 559 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 BMFQ96LC9 184 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 OR1F2PQ96R84 312 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 GPA33Q99795 319 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 GALNT9Q9HCQ5 603 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 FGF21Q9NSA1 209 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NDUFB11Q9NX14 153 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 PPP4R1LQ9P1A2 415 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 RCE1Q9Y256 329 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 PLEKHA6Q9Y2H5 1048 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 TMEM14AQ9Y6G1 99 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 C5orf51A6NDU8 294 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 L7N2F9 121 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 DNAJB6O75190 326 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 ITGA5P08648 1049 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 LIPCP11150 499 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 PGAM2P15259 253 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 GABRG2P18507 467 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 ART1P52961 327 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 OR7A5Q15622 319 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 TRAM1Q15629 374 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 NOXA1Q86UR1 476 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 CRIPAKQ8N1N5 446 aa10.17□□□□□ -0.78
COL27A1-204ENST00000477421 MFSD4AQ8N468 514 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms