RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 POU3F1Q03052 451 aaPredicted RBP13.11□□□□□ -0.31
SMG5-204ENST00000476954 LASP1Q14847 261 aaKnown RBP13.11□□□□□ -0.31
SMG5-204ENST00000476954 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 C3orf36Q3SXR2 165 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 OLIG3Q7RTU3 272 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 AAED1Q7RTV5 226 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 CCDC91Q7Z6B0 441 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 SLC25A43Q8WUT9 341 aaPredicted RBP13.11□□□□□ -0.31
SMG5-204ENST00000476954 ALKBH3Q96Q83 286 aaPredicted RBP13.11□□□□□ -0.31
SMG5-204ENST00000476954 CCDC106Q9BWC9 280 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 HOXD1Q9GZZ0 328 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 NOX3Q9HBY0 568 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 OXSMQ9NWU1 459 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 KCNE5Q9UJ90 142 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 TMCO1Q9UM00 188 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 BIRC6Q9NR09 4857 aa13.11□□□□□ -0.31
SMG5-204ENST00000476954 IGHV2-5P01817 119 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 HMGN2P05204 90 aaKnown RBP13.1□□□□□ -0.31
SMG5-204ENST00000476954 GSNP06396 782 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 RBP1P09455 135 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 NAT2P11245 290 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 IMPDH2P12268 514 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 MAGEB1P43366 347 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 LCN2P80188 198 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 NPRL3Q12980 569 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 RASA2Q15283 850 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 DCST2Q5T1A1 773 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 GPRIN3Q6ZVF9 776 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 JAZF1Q86VZ6 243 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 POMGNT2Q8NAT1 580 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 ZNF416Q9BWM5 594 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 MS4A5Q9H3V2 200 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 PIGUQ9H490 435 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 CHRNA9Q9UGM1 479 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 NUP50Q9UKX7 468 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 FZR1Q9UM11 496 aa13.1□□□□□ -0.31
SMG5-204ENST00000476954 CCDC151A5D8V7 595 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 G3V4G9 280 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 CLDN34H7C241 214 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 SCAMP2O15127 329 aaKnown RBP13.09□□□□□ -0.31
SMG5-204ENST00000476954 DNPH1O43598 174 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 BCAS1O75363 584 aaPredicted RBP13.09□□□□□ -0.31
SMG5-204ENST00000476954 KRT33AO76009 404 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 UBTFL6P0CB48 400 aaPredicted RBP13.09□□□□□ -0.31
SMG5-204ENST00000476954 CBR1P16152 277 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 BEAN1Q3B7T3 259 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 WDFY1Q8IWB7 410 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 GSPT2Q8IYD1 628 aaKnown RBP13.09□□□□□ -0.31
SMG5-204ENST00000476954 FAM110DQ8TAY7 271 aaPredicted RBP13.09□□□□□ -0.31
SMG5-204ENST00000476954 RAB39BQ96DA2 213 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 FAM120BQ96EK7 910 aaKnown RBP13.09□□□□□ -0.31
SMG5-204ENST00000476954 GPA33Q99795 319 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 C1QTNF3Q9BXJ4 246 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 LAT2Q9GZY6 243 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 CRLF2Q9HC73 371 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 DUSP22Q9NRW4 184 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 TMEM181Q9P2C4 612 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 HDGFL3Q9Y3E1 203 aa13.09□□□□□ -0.31
SMG5-204ENST00000476954 TIMM23O14925 209 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 AKAP10O43572 662 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 GPANK1O95872 356 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 NR4A1P22736 598 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 SELENOPP49908 381 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 SERPINB8P50452 374 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 GUCY2DQ02846 1103 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 UAP1Q16222 522 aaPredicted RBP13.08□□□□□ -0.32
SMG5-204ENST00000476954 ALKBH6Q3KRA9 238 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 ARMCX4Q5H9R4 360 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 OTUD3Q5T2D3 398 aaPredicted RBP13.08□□□□□ -0.32
SMG5-204ENST00000476954 SAXO2Q658L1 398 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 NOXRED1Q6NXP6 359 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 ADGRG3Q86Y34 549 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 FAM169BQ8N8A8 192 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 DEFB108BQ8NET1 73 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 OR9K2Q8NGE7 335 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 TMEM234Q8WY98 164 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 RAB8BQ92930 207 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 ZNF382Q96SR6 550 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 STACQ99469 402 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 SIRT3Q9NTG7 399 aaPredicted RBP13.08□□□□□ -0.32
SMG5-204ENST00000476954 ZCCHC3Q9NUD5 404 aaKnown RBP13.08□□□□□ -0.32
SMG5-204ENST00000476954 PLEK2Q9NYT0 353 aa13.08□□□□□ -0.32
SMG5-204ENST00000476954 EPPK1P58107 5090 aaKnown RBP13.08□□□□□ -0.32
SMG5-204ENST00000476954 SLC22A31A6NKX4 558 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 ZNF587BE7ETH6 402 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 UPK3AO75631 287 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 SUPT7LO94864 414 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 GSTA2P09210 222 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 APOBEC1P41238 236 aaKnown RBP13.07□□□□□ -0.32
SMG5-204ENST00000476954 EVX1P49640 407 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 FOXA1P55317 472 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 MRPS11P82912 194 aaKnown RBP13.07□□□□□ -0.32
SMG5-204ENST00000476954 RELBQ01201 579 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 C16orf87Q6PH81 154 aa13.07□□□□□ -0.32
SMG5-204ENST00000476954 SLC35F6Q8N357 371 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms