RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 A0A1B0GVI7 797 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF670-ZNF695F2Z2N8 137 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 FZD7O75084 574 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF432O94892 652 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 GLULP15104 373 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PRKACBP22694 351 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MAP3K8P41279 467 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DNASE1L1P49184 302 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SNRPNP63162 240 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ADAM8P78325 824 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 EIF4EBP2Q13542 120 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PGGHGQ32M88 737 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ITPRIPL2Q3MIP1 535 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MARCH3Q86UD3 253 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 CSNK1A1LQ8N752 337 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR51D1Q8NGF3 324 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR6F1Q8NGZ6 308 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 LMX1AQ8TE12 382 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ADAMTS18Q8TE60 1221 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 RSC1A1Q92681 617 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DUS3LQ96G46 650 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SLC25A44Q96H78 314 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DPYSL5Q9BPU6 564 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TAPBPLQ9BX59 468 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR51J1Q9H342 316 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NOX4Q9NPH5 578 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM74BQ9NUR3 256 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PRR13Q9NZ81 148 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 APOBEC3BQ9UH17 382 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 GMEB2Q9UKD1 530 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 BAIAP2Q9UQB8 552 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PADI2Q9Y2J8 665 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MYLKQ15746 1914 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NYNRINQ9P2P1 1898 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PHF3Q92576 2039 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 A0A0A6YYJ9 748 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ANXA3P12429 323 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PRKCAP17252 672 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ATP5A1P25705 553 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DCTDP32321 178 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SFTPDP35247 375 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DHPSP49366 369 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MTA1Q13330 715 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NFATC4Q14934 902 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 RPE65Q16518 533 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 RSPO4Q2I0M5 234 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MFSD12Q6NUT3 480 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 FAHD1Q6P587 224 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 FIGLAQ6QHK4 219 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 UNQ6126/PRO20091Q6UXV3 157 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 METTL3Q86U44 580 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 KIF18BQ86Y91 864 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR2L5Q8NG80 312 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR56A3Q8NH54 315 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SYNPRQ8TBG9 265 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM163Q8TC26 289 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 GNPDA2Q8TDQ7 276 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 RASSF5Q8WWW0 418 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OSTF1Q92882 214 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 EMC6Q9BV81 110 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SYT4Q9H2B2 425 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OR51B6Q9H340 312 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MYNNQ9NPC7 610 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 MKKSQ9NPJ1 570 aaPredicted RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PRSS16Q9NQE7 514 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ASB6Q9NWX5 421 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SIDT1Q9NXL6 827 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NEUROG3Q9Y4Z2 214 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 CACNG2Q9Y698 323 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 COLEC10Q9Y6Z7 277 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SPG11Q96JI7 2443 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 KIAA2026Q5HYC2 2103 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 FAM208BQ5VWN6 2430 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SHISA3A0PJX4 238 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ZAR1LA6NP61 321 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 FGF17O60258 216 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 CTNSO60931 367 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SEMA7AO75326 666 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DNAJB5O75953 348 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 OPRD1P41143 372 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 AKR1C3P42330 323 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 RFX2P48378 723 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 CSNK1EP49674 416 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 HNRNPFP52597 415 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SORDQ00796 357 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 PRDX1Q06830 199 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 GNA13Q14344 377 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 CDK10Q15131 360 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 ZNF77Q15935 545 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 Q5BKY6 102 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NKAPLQ5M9Q1 402 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 DCST2Q5T1A1 773 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SFRP5Q5T4F7 317 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 SFXN4Q6P4A7 337 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TMEM88Q6PEY1 159 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 NHLRC1Q6VVB1 395 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 RHOUQ7L0Q8 258 aa4.61□□□□□ -1.67
CCDC39-204ENST00000476379 TSEN54Q7Z6J9 526 aaKnown RBP4.61□□□□□ -1.67
CCDC39-204ENST00000476379 KRT77Q7Z794 578 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms