RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 ZNF883P0CG24 379 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 GP1BBP13224 206 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 SLC2A5P22732 501 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 AVPR2P30518 371 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 AQP2P41181 271 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 P2RX1P51575 399 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 CCDC157Q569K6 752 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 OR5M10Q6IEU7 315 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 C16orf87Q6PH81 154 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 GDPGP1Q6ZNW5 385 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 LINC00299Q6ZSB3 139 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 OR10H4Q8NGA5 316 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 B4GALNT2Q8NHY0 566 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 SPRYD4Q8WW59 207 aaPredicted RBP16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 KATNB1Q9BVA0 655 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 JAM3Q9BX67 310 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 WDR54Q9H977 334 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 HMG20AQ9NP66 347 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 ISYNA1Q9NPH2 558 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 TOR4AQ9NXH8 423 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 SLC39A1Q9NY26 324 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 KLHL21Q9UJP4 597 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 SSR3Q9UNL2 185 aa16.67■□□□□ 0.26
SEC61A2-213ENST00000475268 C2orf72A6NCS6 295 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 LRRTM2O43300 516 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 WISP1O95388 367 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 LALBAP00709 142 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 IDUAP35475 653 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 RPS5P46782 204 aaKnown RBP16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 LTBQ06643 244 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 TPBGQ13641 420 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 QPRTQ15274 297 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 DBX2Q6ZNG2 339 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 GHDCQ8N2G8 530 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 DNAJA3Q96EY1 480 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 C6orf62Q9GZU0 229 aaPredicted RBP16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 NRIP3Q9NQ35 241 aa16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 NXT1Q9UKK6 140 aaKnown RBP16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 YARS2Q9Y2Z4 477 aaKnown RBP16.66■□□□□ 0.26
SEC61A2-213ENST00000475268 DAPL1A0PJW8 107 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 PLD2O14939 933 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 CDC40O60508 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 SERPINI2O75830 405 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ZFAND5O76080 213 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 TMED1Q13445 227 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ZNF846Q147U1 533 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ZNF322Q6U7Q0 402 aaPredicted RBP16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 OR52N1Q8NH53 320 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 LIPHQ8WWY8 451 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 TAAR8Q969N4 342 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 TMCO6Q96DC7 493 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 CDADC1Q9BWV3 514 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ASPNQ9BXN1 380 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 MMP27Q9H306 513 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ISG20L2Q9H9L3 353 aaKnown RBP16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 AKIP1Q9NQ31 210 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 CCDC59Q9P031 241 aaKnown RBP16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 HIF3AQ9Y2N7 669 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 FLRT2O43155 660 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ASAH2BP0C7U1 165 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 RPS25P62851 125 aaKnown RBP16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 COL28A1Q2UY09 1125 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 OR51L1Q8NGJ5 315 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 OR8K3Q8NH51 312 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 GPR119Q8TDV5 335 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 SMAP2Q8WU79 429 aaPredicted RBP16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 S100ZQ8WXG8 99 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 RASD2Q96D21 266 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 C1GALT1C1Q96EU7 318 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 NMNAT3Q96T66 252 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ALG8Q9BVK2 526 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ADGRL4Q9HBW9 690 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 PCDHGB2Q9Y5G2 931 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 R4GN57 208 aa16.65■□□□□ 0.26
SEC61A2-213ENST00000475268 ADAM10O14672 748 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 ARPC3O15145 178 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 AKAP8O43823 692 aaKnown RBP16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 SLC25A12O75746 678 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 SBK2P0C263 348 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 SOX6P35712 828 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 ALG10Q5BKT4 473 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 TMPRSS11AQ6ZMR5 421 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 KLBQ86Z14 1044 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 LOXL4Q96JB6 756 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 LRFN5Q96NI6 719 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 CMKLR1Q99788 373 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 TM9SF2Q99805 663 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 WDR12Q9GZL7 423 aaKnown RBP16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 MYOTQ9UBF9 498 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 CAB39Q9Y376 341 aaPredicted RBP16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 PTRH2Q9Y3E5 179 aaKnown RBP16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 MPDZO75970 2070 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 C9J4A7 227 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 HIST1H2ABP04908 130 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 BMP4P12644 408 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 POLR2HP52434 150 aaKnown RBP16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 C1QL3Q5VWW1 255 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 FAM198BQ6UWH4 519 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 HIST3H2AQ7L7L0 130 aa16.64■□□□□ 0.25
SEC61A2-213ENST00000475268 NANOGNBQ7Z5D8 188 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms