RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 TMEM45AQ9NWC5 275 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 KCNE5Q9UJ90 142 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 IGHV1-18A0A0C4DH31 117 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 OR6C65A6NJZ3 312 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 KLF11O14901 512 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 FGF4P08620 206 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 UQCRBP14927 111 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 CDH2P19022 906 aaPredicted RBP10.96□□□□□ -0.65
SKA3-206ENST00000475251 CDH15P55291 814 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 RPS26P62854 115 aaKnown RBP10.96□□□□□ -0.65
SKA3-206ENST00000475251 HBA1P69905 142 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 PTGR1Q14914 329 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 SLC17A1Q14916 467 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 ADIPOQQ15848 244 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 ATP6AP1LQ52LC2 224 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 HIKESHIQ53FT3 197 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 EMBQ6PCB8 327 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 PAQR6Q6TCH4 344 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 DEF8Q6ZN54 512 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 AAED1Q7RTV5 226 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 C6orf120Q7Z4R8 191 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 GLCCI1Q86VQ1 547 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 ADGRG3Q86Y34 549 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 ARFGAP2Q8N6H7 521 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 C3orf56Q8N813 242 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 MNS1Q8NEH6 495 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 NUP37Q8NFH4 326 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 MZB1Q8WU39 189 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 WDR60Q8WVS4 1066 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 SLC35G5Q96KT7 338 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 DUSP26Q9BV47 211 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 OR11A1Q9GZK7 315 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.96□□□□□ -0.65
SKA3-206ENST00000475251 WDR45Q9Y484 360 aa10.96□□□□□ -0.65
SKA3-206ENST00000475251 TMED7-TICAM2A0A0A6YYA0 188 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 CENPVL1A0A0U1RR11 272 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 RNF103-CHMP3A0A140T963 221 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 A0A1W2PPM1 405 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 B4DSR2 109 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 ZNF587BE7ETH6 402 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 COPEO14579 308 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 PIP5K1BO14986 540 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 TRIM13O60858 407 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 LILRA1O75019 489 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 PEX11AO75192 247 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 CCNA2P20248 432 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
SKA3-206ENST00000475251 POLR2HP52434 150 aaKnown RBP10.95□□□□□ -0.66
SKA3-206ENST00000475251 KCNJ10P78508 379 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 HPCAP84074 193 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 TBRG1Q3YBR2 411 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 OTUD3Q5T2D3 398 aaPredicted RBP10.95□□□□□ -0.66
SKA3-206ENST00000475251 VHLLQ6RSH7 139 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 RINLQ6ZS11 566 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 ZNF786Q8N393 782 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 TEX29Q8N6K0 151 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 FAM169BQ8N8A8 192 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 FNDC5Q8NAU1 212 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 MIPOL1Q8TD10 442 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 ZNF418Q8TF45 676 aaPredicted RBP10.95□□□□□ -0.66
SKA3-206ENST00000475251 DNAJA3Q96EY1 480 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 ANKRD27Q96NW4 1050 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 SNX18Q96RF0 628 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 ZNF442Q9H7R0 627 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 DYNLRB1Q9NP97 96 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 TMED7Q9Y3B3 224 aa10.95□□□□□ -0.66
SKA3-206ENST00000475251 ARPC4-TTLL3A0A0A6YYG9 625 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 GPR37O15354 613 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 SLU7O95391 586 aaKnown RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 GPIP06744 558 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 IFNGR1P15260 489 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 NPR2P20594 1047 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 IDH2P48735 452 aaKnown RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 KHKP50053 298 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 NAAAQ02083 359 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 MAD2L1Q13257 205 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 IL23RQ5VWK5 629 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 AP1ARQ63HQ0 302 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 TYW3Q6IPR3 259 aaKnown RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 SHQ1Q6PI26 577 aaKnown RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 C10orf107Q8IVU9 208 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 CMIPQ8IY22 773 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 SEMA6DQ8NFY4 1073 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 OR9K2Q8NGE7 335 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 OR1K1Q8NGR3 316 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 MAGEE2Q8TD90 523 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 UBASH3BQ8TF42 649 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 GCDHQ92947 438 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 AURKBQ96GD4 344 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 GATA5Q9BWX5 397 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 SERHL2Q9H4I8 314 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 METTL17Q9H7H0 456 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 PPCSQ9HAB8 311 aa10.94□□□□□ -0.66
SKA3-206ENST00000475251 CRNNQ9UBG3 495 aaPredicted RBP10.94□□□□□ -0.66
SKA3-206ENST00000475251 TMEM72A0PK05 275 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 TRIM77I1YAP6 450 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 hCG_2039718K7EN88 272 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 NPHS1O60500 1241 aa10.93□□□□□ -0.66
SKA3-206ENST00000475251 VAMP5O95183 116 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms