RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 SYT10Q6XYQ8 523 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 AAED1Q7RTV5 226 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 C16orf62Q7Z3J2 963 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 LSRQ86X29 649 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-211ENST00000475184 DDIASQ8IXT1 998 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 SVOPLQ8N434 492 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 NATD1Q8N6N6 113 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 OR4F15Q8NGB8 312 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 OR1K1Q8NGR3 316 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 UBASH3BQ8TF42 649 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 MZB1Q8WU39 189 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 FAM216AQ8WUB2 273 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 COQ8BQ96D53 544 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 TMEM45AQ9NWC5 275 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 PSMC3IPQ9P2W1 217 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-211ENST00000475184 CRNNQ9UBG3 495 aaPredicted RBP13.78□□□□□ -0.2
ITGB1-211ENST00000475184 TBK1Q9UHD2 729 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 PCDHGB4Q9UN71 923 aa13.78□□□□□ -0.2
ITGB1-211ENST00000475184 PLIN3O60664 434 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 KRT33AO76009 404 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 LGI1O95970 557 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 IMPDH2P12268 514 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 CPA3P15088 417 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 NPR2P20594 1047 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 CALCRP30988 508 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 HTR3AP46098 478 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 KHKP50053 298 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 UBE2NP61088 152 aaKnown RBP13.77□□□□□ -0.21
ITGB1-211ENST00000475184 C3orf36Q3SXR2 165 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 FAM153CQ494X1 144 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 SHQ1Q6PI26 577 aaKnown RBP13.77□□□□□ -0.21
ITGB1-211ENST00000475184 ZIC4Q8N9L1 334 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 NUP37Q8NFH4 326 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 OR9K2Q8NGE7 335 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 OIT3Q8WWZ8 545 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 DDIT4LQ96D03 193 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 AURKBQ96GD4 344 aaPredicted RBP13.77□□□□□ -0.21
ITGB1-211ENST00000475184 ZNF385AQ96PM9 386 aaKnown RBP13.77□□□□□ -0.21
ITGB1-211ENST00000475184 DOK1Q99704 481 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 ZNF442Q9H7R0 627 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 SEC61A2Q9H9S3 476 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 DYNLRB1Q9NP97 96 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 EXD2Q9NVH0 621 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 GIMAP2Q9UG22 337 aa13.77□□□□□ -0.21
ITGB1-211ENST00000475184 TMED7-TICAM2A0A0A6YYA0 188 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ARPC4-TTLL3A0A0A6YYG9 625 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 A0A1W2PPM1 405 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TMEM233B4DJY2 109 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ZNF587BE7ETH6 402 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ZNF208O43345 1280 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 SKAP2O75563 359 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 LYPLA1O75608 230 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 IGLV1-44P01699 117 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 THBS4P35443 961 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 IDH2P48735 452 aaKnown RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TUBA1BP68363 451 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TUBA4AP68366 448 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 HGFACQ04756 655 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ADRM1Q16186 407 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 OTUD3Q5T2D3 398 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TYW3Q6IPR3 259 aaKnown RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TUBA1AQ71U36 451 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 C6orf120Q7Z4R8 191 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 SPATA21Q7Z572 469 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 KRTCAP2Q8N6L1 136 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 CCDC63Q8NA47 563 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TWIST2Q8WVJ9 160 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 PMM1Q92871 262 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TMEM186Q96B77 213 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 SLC35G5Q96KT7 338 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 PPP3R2Q96LZ3 170 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ANKRD27Q96NW4 1050 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 ALKBH3Q96Q83 286 aaPredicted RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 PRPF18Q99633 342 aaKnown RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 EXOSC3Q9NQT5 275 aaKnown RBP13.76□□□□□ -0.21
ITGB1-211ENST00000475184 HIF1ANQ9NWT6 349 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 TMED7Q9Y3B3 224 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 WDR45Q9Y484 360 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 SPEF1Q9Y4P9 236 aa13.76□□□□□ -0.21
ITGB1-211ENST00000475184 NOTCH1P46531 2555 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 RNF103-CHMP3A0A140T963 221 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 TMEM72A0PK05 275 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 SH3PXD2BA1X283 911 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 ZC3H12DA2A288 527 aaKnown RBP13.75□□□□□ -0.21
ITGB1-211ENST00000475184 VSTM5A8MXK1 200 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 LYNX1G3V0Z9 82 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 TRIM77I1YAP6 450 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 NR5A2O00482 541 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 PIP5K1BO14986 540 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 RIPK2O43353 540 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 IGFBP1P08833 259 aaPredicted RBP13.75□□□□□ -0.21
ITGB1-211ENST00000475184 LYNX1P0DP58 116 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 CREB1P16220 341 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 POLR2HP52434 150 aaKnown RBP13.75□□□□□ -0.21
ITGB1-211ENST00000475184 HILS1P60008 231 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 IL1RL1Q01638 556 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 PLAURQ03405 335 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 ATAD3BQ5T9A4 648 aa13.75□□□□□ -0.21
ITGB1-211ENST00000475184 AP1ARQ63HQ0 302 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms