RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 IPPKQ9H8X2 491 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 DNAJC4Q9NNZ3 241 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PTTG3PQ9NZH4 202 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 GULP1Q9UBP9 304 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 LEF1Q9UJU2 399 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MRTO4Q9UKD2 239 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CYP8B1Q9UNU6 501 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 hCG_38984A0A1B0GV85 526 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MBLAC1A4D2B0 266 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PRORSD1PA6NEY8 169 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CCDC182A6NF36 153 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 DSCR3O14972 297 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PJA2O43164 708 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 OIP5O43482 229 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 RPLP0P05388 317 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 CYB561P49447 251 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 PRKCDQ05655 676 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 ATP6V1FQ16864 119 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 NRN1LQ496H8 165 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SLC22A6Q4U2R8 563 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 N4BP2L1Q5TBK1 243 aaPredicted RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TMEM236Q5W0B7 351 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 HLA-DQA1Q5Y7H0 255 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 BAP18Q8IXM2 172 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 KDM8Q8N371 416 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SLC35C1Q96A29 364 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 SLCO4A1Q96BD0 722 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MALSU1Q96EH3 234 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 DTD2Q96FN9 168 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 LRCH3Q96II8 777 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 MS4A4EQ96PG1 132 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 FUNDC2Q9BWH2 189 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 C20orf27Q9GZN8 174 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 WDCPQ9H6R7 721 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 LGALS13Q9UHV8 139 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 EXOGQ9Y2C4 368 aaKnown RBP4.48□□□□□ -1.69
NPHP3-206ENST00000474871 HS3ST3A1Q9Y663 406 aa4.48□□□□□ -1.69
NPHP3-206ENST00000474871 TRIM49D1C9J1S8 452 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 EIF1AYO14602 144 aaKnown RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SLC19A2O60779 497 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 RP2O75695 350 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 GLUD1P00367 558 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 HPP00738 406 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 F12P00748 615 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 TDGF1P13385 188 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 EDN2P20800 178 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 CDKN2DP55273 166 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 RHOAP61586 193 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 EMX1Q04741 257 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 CCDC85BQ15834 202 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 DRAM2Q6UX65 266 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 PAMR1Q6UXH9 720 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ABHD15Q6UXT9 468 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 OVCH1Q7RTY7 1134 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ZNF100Q8IYN0 542 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 OR4D5Q8NGN0 318 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 C3orf30Q96M34 536 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 UTP23Q9BRU9 249 aaKnown RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 KRTAP3-3Q9BYR6 98 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 KRTAP3-2Q9BYR7 98 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 TM6SF2Q9BZW4 377 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 S1PR5Q9H228 398 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 PRO1933Q9H354 126 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ELOVL6Q9H5J4 265 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 REEP4Q9H6H4 257 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 DDIT4Q9NX09 232 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SPG21Q9NZD8 308 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SEC14L4Q9UDX3 406 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 CGGBP1Q9UFW8 167 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 A0A087WUJ7 227 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 A0A087WXM4 84 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SLC35F4A4IF30 521 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 FAM187AA6NFU0 413 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 MGAT4DA6NG13 374 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 B4DXG7 233 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 H3BML4 177 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 IGSF6O95976 241 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SERPINE2P07093 398 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 GPD1P21695 349 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 TGM2P21980 687 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 KDELR1P24390 212 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 BIDP55957 195 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 CD81P60033 236 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 SRSF1Q07955 248 aaKnown RBP eCLIP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 MESTQ5EB52 335 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 PTAR1Q7Z6K3 402 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 CCDC71Q8IV32 467 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 LGI4Q8N135 537 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 C17orf78Q8N4C9 275 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 VOPP1Q96AW1 172 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 RNF125Q96EQ8 232 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 URM1Q9BTM9 101 aaKnown RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 ING2Q9H160 280 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 C12orf65Q9H3J6 166 aaKnown RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 R3HDMLQ9H3Y0 253 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 TXNRD2Q9NNW7 524 aa4.47□□□□□ -1.69
NPHP3-206ENST00000474871 KRCC1Q9NPI7 259 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 FBXO6Q9NRD1 293 aaPredicted RBP4.47□□□□□ -1.69
NPHP3-206ENST00000474871 STRAPQ9Y3F4 350 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms