RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 IGHV1-2P23083 117 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 SLC6A2P23975 617 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 NTF4P34130 210 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 HOXC5Q00444 222 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 BNIP2Q12982 314 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 CEACAM7Q14002 265 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 SCARB2Q14108 478 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 SLC17A1Q14916 467 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 TAB1Q15750 504 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 PAQR6Q6TCH4 344 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.89□□□□□ -0.83
CKS1B-206ENST00000474215 ATG4DQ86TL0 474 aaPredicted RBP9.89□□□□□ -0.83
CKS1B-206ENST00000474215 RETREG3Q86VR2 466 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 LSRQ86X29 649 aaPredicted RBP9.89□□□□□ -0.83
CKS1B-206ENST00000474215 PIGTQ969N2 578 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 C3orf49Q96BT1 292 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 ANKRD27Q96NW4 1050 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 ZNF607Q96SK3 696 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 PIP5K1AQ99755 562 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 CPPED1Q9BRF8 314 aaPredicted RBP9.89□□□□□ -0.83
CKS1B-206ENST00000474215 TMEM204Q9BSN7 226 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 TMUB1Q9BVT8 246 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 RSPO3Q9BXY4 272 aaPredicted RBP9.89□□□□□ -0.83
CKS1B-206ENST00000474215 NGBQ9NPG2 151 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 AKAP6Q13023 2319 aa9.89□□□□□ -0.83
CKS1B-206ENST00000474215 F8P00451 2351 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 PRORSD1PA6NEY8 169 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 FRS3O43559 492 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 TPST1O60507 370 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 SERPINB7O75635 380 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 AKR7A3O95154 331 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 IGHV3-9P01782 118 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 TROVE2P10155 538 aaKnown RBP eCLIP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 GGT1P19440 569 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 COX5AP20674 150 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 ADSLP30566 484 aaPredicted RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 HOXC12P31275 282 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 ADAM8P78325 824 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 NFYCQ13952 458 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 CAPRIN1Q14444 709 aaKnown RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 OR7A5Q15622 319 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 OTUD3Q5T2D3 398 aaPredicted RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 C1orf140Q5VVS0 124 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 TMEM225Q6GV28 225 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 DHRS4L2Q6PKH6 230 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 ZNF704Q6ZNC4 412 aaPredicted RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 C20orf204Q6ZNR8 217 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 DHDDSQ86SQ9 333 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 P2RY8Q86VZ1 359 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 ZNF433Q8N7K0 673 aaPredicted RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 TMEM99Q8N816 258 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 LSMEM1Q8N8F7 131 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 HIPK4Q8NE63 616 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 MUCL1Q96DR8 90 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 CGREF1Q99674 301 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 SF3B5Q9BWJ5 86 aaKnown RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 TAPBPLQ9BX59 468 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 TMEM120AQ9BXJ8 343 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 ESRP2Q9H6T0 727 aaKnown RBP9.88□□□□□ -0.83
CKS1B-206ENST00000474215 ASB6Q9NWX5 421 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 RPS6KB2Q9UBS0 482 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 SLC9A8Q9Y2E8 581 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 FLVCR1Q9Y5Y0 555 aa9.88□□□□□ -0.83
CKS1B-206ENST00000474215 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
CKS1B-206ENST00000474215 AQP7P3A6NL99 342 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 ELOA3DA6NLF2 546 aaPredicted RBP9.87□□□□□ -0.83
CKS1B-206ENST00000474215 TMEM229AB2RXF0 380 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 SMPD2O60906 423 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 NPIPB7O75200 414 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 PLAUP00749 431 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 AQP1P29972 269 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 NKX6-1P78426 367 aaPredicted RBP9.87□□□□□ -0.83
CKS1B-206ENST00000474215 RBBP4Q09028 425 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 FAPQ12884 760 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 ELOA3BQ3SY89 546 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 GLIPR1L2Q4G1C9 344 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 HSP90B2PQ58FF3 399 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 TIMM23BQ5SRD1 257 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 NCMAPQ5T1S8 102 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 SSX8Q7RTT4 187 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 COMTD1Q86VU5 262 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 PTOV1Q86YD1 416 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 ARMC8Q8IUR7 673 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 ZIC4Q8N9L1 334 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 C11orf65Q8NCR3 313 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 BHLHE22Q8NFJ8 381 aaPredicted RBP9.87□□□□□ -0.83
CKS1B-206ENST00000474215 ELOA3Q8NG57 546 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 OR52E4Q8NGH9 312 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 STK35Q8TDR2 534 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 DNAJA4Q8WW22 397 aaPredicted RBP9.87□□□□□ -0.83
CKS1B-206ENST00000474215 TRIM2Q9C040 744 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 PIF1Q9H611 641 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 C12orf10Q9HB07 376 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 MRGBPQ9NV56 204 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 FGFR1OP2Q9NVK5 253 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 ADPRHL2Q9NX46 363 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 MALT1Q9UDY8 824 aa9.87□□□□□ -0.83
CKS1B-206ENST00000474215 A0A1B0GWA3 101 aa9.86□□□□□ -0.83
CKS1B-206ENST00000474215 CIB4A0PJX0 185 aa9.86□□□□□ -0.83
CKS1B-206ENST00000474215 OR5H1A6NKK0 313 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms