RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 OR7A5Q15622 319 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 TBR1Q16650 682 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 ZBED5Q49AG3 693 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 NHSL2Q5HYW2 709 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 LINC00114Q6XXX2 140 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF620Q6ZNG0 422 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 YRDCQ86U90 279 aaKnown RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MEX3DQ86XN8 651 aaKnown RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 ADGRG3Q86Y34 549 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MEIOBQ8N635 442 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR5M1Q8NGP8 315 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR13C2Q8NGS9 318 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR6S1Q8NH40 331 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR51A7Q8NH64 312 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 C9orf43Q8TAL5 461 aaPredicted RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 TFAP2CQ92754 450 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 EXTL1Q92935 676 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MBOAT4Q96T53 435 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 NAA11Q9BSU3 229 aaPredicted RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 TSSK6Q9BXA6 273 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 POTEKPQ9BYX7 375 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 ANKRD60Q9BZ19 345 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR2B2Q9GZK3 357 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 OR52D1Q9H346 318 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF703Q9H7S9 590 aaPredicted RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 PROK2Q9HC23 129 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MEPEQ9NQ76 525 aaPredicted RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 DEPPQ9NTK1 212 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 C20orf141Q9NUB4 165 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 BLOC1S6Q9UL45 172 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 BAIAP2Q9UQB8 552 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MRPS18CQ9Y3D5 142 aaKnown RBP9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 HDGFL3Q9Y3E1 203 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 LRRC42Q9Y546 428 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 MED13Q9UHV7 2174 aa9.29□□□□□ -0.92
PRPF38A-202ENST00000474048 TRAV27A0A087WT01 109 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 A0A087WV48 116 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 OR2M5A3KFT3 312 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 RIIAD1A6NNX1 92 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 MCIDASD6RGH6 385 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC16A6O15403 523 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SEC14L5O43304 696 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 RNF13O43567 381 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 DENRO43583 198 aaKnown RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 CRYABP02511 175 aaKnown RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 HMGN1P05114 100 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ADORA3P0DMS8 318 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 MAKP20794 623 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 PAICSP22234 425 aaKnown RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 AHCYP23526 432 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 CHMP24386 653 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 GGT2P36268 569 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 MAGEA5P43359 124 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 DLX5P56178 289 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 RPS3AP61247 264 aaKnown RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 RAC1P63000 192 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC35A1P78382 337 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 PDK3Q15120 406 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 PTGES3Q15185 160 aaKnown RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 INAQ16352 499 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SGCBQ16585 318 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF74Q16587 644 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 TMEM176BQ3YBM2 270 aaPredicted RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 WIPI1Q5MNZ9 446 aaPredicted RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 CLEC12AQ5QGZ9 265 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC6A19Q695T7 634 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ANKRD34AQ69YU3 496 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ARHGAP11AQ6P4F7 1023 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 IGFL3Q6UXB1 125 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ASB18Q6ZVZ8 466 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 PTCHD4Q6ZW05 846 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ZNF227Q86WZ6 799 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 UBQLNLQ8IYU4 475 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ZFP62Q8NB50 900 aaPredicted RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 OR5J2Q8NH18 312 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 MFSD8Q8NHS3 518 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 KTI12Q96EK9 354 aaPredicted RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 DNAJA3Q96EY1 480 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 KLHL15Q96M94 604 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 OR11A1Q9GZK7 315 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 EGLN3Q9H6Z9 239 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 PNPLA3Q9NST1 481 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 CLN6Q9NWW5 311 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 ALKBH4Q9NXW9 302 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 H2AFY2Q9P0M6 372 aaPredicted RBP9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SLC6A5Q9Y345 797 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 HSPE1-MOB4S4R3N1 261 aa9.28□□□□□ -0.92
PRPF38A-202ENST00000474048 SPTBN2O15020 2390 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 IGKV1D-42A0A075B6H8 117 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 TRGV5A0A0B4J1U4 118 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 A0A1W2PRG6 482 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 PINLYPA6NC86 204 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 ETV2O00321 342 aaPredicted RBP9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 EIF1AYO14602 144 aaKnown RBP9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 XKRYO14609 159 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 EIF1BO60739 113 aaKnown RBP9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 SERPINI2O75830 405 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 NTN1O95631 604 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 HPNP05981 417 aa9.27□□□□□ -0.93
PRPF38A-202ENST00000474048 ZNF3P17036 446 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms