RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SUPT3HB4E1H0 165 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 WASH3PC4AMC7 463 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NEDD8-MDP1E9PL57 170 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C5orf67F2Z3F1 127 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA8NF8WBI6 632 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 H0Y626 953 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 H0YHG0 523 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FXYD1O00168 92 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 AP3B1O00203 1094 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CDC7O00311 574 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 E2F3O00716 465 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FBP2O00757 339 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 OR7A17O14581 309 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 AZIN1O14977 448 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TAPBPO15533 448 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PSMD3O43242 534 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SPRY1O43609 319 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DIAPH2O60879 1101 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TBX10O75333 385 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ENTPD5O75356 428 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SUPT3HO75486 399 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ATP6AP2O75787 350 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CEACAM4O75871 244 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NEBLO76041 1014 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TM7SF2O76062 418 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SRP72O76094 671 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RHOBTB1O94844 696 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CDK14O94921 469 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PSMG1O95456 288 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CXCL14O95715 111 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HSPA4LO95757 839 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 IGSF6O95976 241 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SOD1P00441 154 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 EPOP01588 193 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 C1QCP02747 245 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 UGT2B4P06133 528 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 APOA4P06727 396 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINA6P08185 405 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CISD3P0C7P0 127 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC166P0CW27 439 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TPBGLP0DKB5 382 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 VPREB1P12018 145 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 COX4I1P13073 169 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HLA-EP13747 358 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CPA3P15088 417 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 STMN1P16949 149 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 XRCC1P18887 633 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 UGT1A6P19224 532 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ATP6V1B2P21281 511 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RPS3P23396 243 aaKnown RBP eCLIP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PTPN4P29074 926 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CRABP2P29373 138 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 EEF1DP29692 281 aaKnown RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CSTF2P33240 577 aaKnown RBP eCLIP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 UGT1A3P35503 534 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 UGT1A5P35504 534 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SERPINB5P36952 375 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SPAM1P38567 509 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NNMTP40261 264 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 BDKRB1P46663 353 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RAP1GDS1P52306 607 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 NAGLUP54802 743 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MTTPP55157 894 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DNAJB13P59910 316 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 AP1S1P61966 158 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 HERVK_113P63132 956 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CDK3Q00526 305 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 KDSRQ06136 332 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CACNG1Q06432 222 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 LCP2Q13094 533 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 STX3Q13277 289 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF177Q13360 481 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RIPK1Q13546 671 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CUL3Q13618 768 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GRB7Q14451 532 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 IL11RAQ14626 422 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 RCN1Q15293 331 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 TAF1AQ15573 450 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CHRNA6Q15825 494 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 FAM189A2Q15884 450 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SNCBQ16143 134 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 PHKG1Q16816 387 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ODF4Q2M2E3 257 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 UGT3A2Q3SY77 523 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 POM121L1PQ3SYA9 428 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC153Q494R4 210 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CCSMST1Q4G0I0 132 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF658BQ4V348 819 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 MPPE1Q53F39 396 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 SFT2D3Q587I9 215 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZRANB3Q5FWF4 1079 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 XKR7Q5GH72 579 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF678Q5SXM1 525 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 GARNL3Q5VVW2 1013 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ARMC3Q5W041 872 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC66Q68CR7 880 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 REP15Q6BDI9 236 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 CLEC6AQ6EIG7 209 aa1.23□□□□□ -2.21
CCDC39-203ENST00000473854 DHRS7BQ6IAN0 325 aaPredicted RBP1.23□□□□□ -2.21
CCDC39-203ENST00000473854 ADNP2Q6IQ32 1131 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms