RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 SERINC1Q9NRX5 453 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 CLCF1Q9UBD9 225 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 SLC5A6Q9Y289 635 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 TMED7Q9Y3B3 224 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 SPIN1Q9Y657 262 aaPredicted RBP8.16□□□□□ -1.1
SMC4-214ENST00000472991 V9GYQ6 96 aa8.16□□□□□ -1.1
SMC4-214ENST00000472991 A0A0B4J2E0 115 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 A0A1B0GX12 115 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ZC3H12DA2A288 527 aaKnown RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 GJE1A6NN92 205 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 CXCL13O43927 109 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 FMO6PO60774 539 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 AGFG2O95081 481 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 HOXD4P09016 255 aaPredicted RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 GLI4P10075 376 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 PTNP21246 168 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ATP6V1B2P21281 511 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 CXCR1P25024 350 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 PER3P56645 1201 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ADORA2A-AS1P86434 159 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 SF3B4Q15427 424 aaKnown RBP eCLIP8.15□□□□□ -1.12e-8■■■■□ 23.1
SMC4-214ENST00000472991 OR1Q1Q15612 314 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 SGCBQ16585 318 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 IFI44LQ53G44 452 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ENTPD8Q5MY95 495 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 NSUN5P2Q63ZY6 315 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 HBMQ6B0K9 141 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 DEF8Q6ZN54 512 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 SEM1Q6ZVN7 128 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 CHMP1BQ7LBR1 199 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ADGRE4PQ86SQ3 457 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ATG4DQ86TL0 474 aaPredicted RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 TSPYL5Q86VY4 417 aaPredicted RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 FAM86B1Q8N7N1 296 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 LSMEM1Q8N8F7 131 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ZPLD1Q8TCW7 415 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 PHF10Q8WUB8 498 aaKnown RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 SLC25A43Q8WUT9 341 aaPredicted RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 ARL5BQ96KC2 179 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 NSMCE2Q96MF7 247 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 TTYH2Q9BSA4 534 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 SRXN1Q9BYN0 137 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 OR11A1Q9GZK7 315 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 TMEM27Q9HBJ8 222 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 DCAF13Q9NV06 445 aaKnown RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 FOXD3Q9UJU5 478 aaPredicted RBP8.15□□□□□ -1.1
SMC4-214ENST00000472991 RPS6KA6Q9UK32 745 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 LRRK2Q5S007 2527 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 ICE1Q9Y2F5 2266 aa8.15□□□□□ -1.1
SMC4-214ENST00000472991 CLEC18AA5D8T8 446 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 MBD3L4A6NDZ8 208 aaPredicted RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 MBD3L3A6NE82 208 aaPredicted RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 MBD3L5A6NJ08 208 aaPredicted RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 CD8B2A6NJW9 211 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 SLC22A20A6NK97 555 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ADAMDEC1O15204 470 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ZG16O60844 167 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 ATP5HO75947 161 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 TOXO94900 526 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 TGM6O95932 706 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 RNF224P0DH78 156 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 RASSF2P50749 326 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 PMPCAQ10713 525 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 PON3Q15166 354 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ZNF239Q16600 458 aaKnown RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 ALG10BQ5I7T1 473 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 PDSS1Q5T2R2 415 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 TMEM211Q6ICI0 200 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 MTFR2Q6P444 385 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ZNF613Q6PF04 617 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ULK3Q6PHR2 472 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 CLEC18BQ6UXF7 455 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 CYP2R1Q6VVX0 501 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 CCDC121Q6ZUS5 278 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 FKBP9P1Q75LS8 142 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 P4HA3Q7Z4N8 544 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 FAM26EQ8N5C1 309 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 C9orf106Q8NAJ2 232 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 CLEC18CQ8NCF0 446 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 MBD3L2Q8NHZ7 208 aaPredicted RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 FNDC9Q8TBE3 224 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ADAMTS16Q8TE57 1224 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 DNAJA4Q8WW22 397 aaPredicted RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 GEMIN6Q8WXD5 167 aaKnown RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 DDIT4LQ96D03 193 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 KRTAP4-12Q9BQ66 201 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 CADM1Q9BY67 442 aaKnown RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 MUC13Q9H3R2 512 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 GORASP2Q9H8Y8 452 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 CALHM2Q9HA72 323 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 C12orf10Q9HB07 376 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 SELENONQ9NZV5 590 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 ACTR3BQ9P1U1 418 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 PRDM4Q9UKN5 801 aa8.14□□□□□ -1.11
SMC4-214ENST00000472991 MCTS1Q9ULC4 181 aaKnown RBP8.14□□□□□ -1.11
SMC4-214ENST00000472991 SAMD4AQ9UPU9 718 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms