RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SHISA2Q6UWI4 295 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 LINGO2Q7L985 606 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 SLC46A3Q7Z3Q1 461 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 C6orf120Q7Z4R8 191 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 MYPOPQ86VE0 399 aaPredicted RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 CARM1Q86X55 608 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 C10orf107Q8IVU9 208 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 LRRC17Q8N6Y2 441 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 PLPP7Q8NBV4 271 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 OR56A1Q8NGH5 318 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 RNF217Q8TC41 542 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CCDC126Q96EE4 140 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 BOD1Q96IK1 185 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 IQCGQ9H095 443 aaKnown RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 SERINC1Q9NRX5 453 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 EMC3Q9P0I2 261 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CHRNA9Q9UGM1 479 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 DCTN4Q9UJW0 460 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 FAF1Q9UNN5 650 aaPredicted RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 PCDHGB1Q9Y5G3 927 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 H3BQF6 201 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 AP3D1O14617 1153 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 GPR171O14626 319 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 SHBGP04278 402 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TACSTD2P09758 323 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 OR4A8P0C604 315 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 PGCP20142 388 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 MATN1P21941 496 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 GIFP27352 417 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 DVL1P1P54792 670 aaPredicted RBP8.08□□□□□ -1.12
VCL-204ENST00000472585 OR2B6P58173 313 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TUBA1BP68363 451 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TUBA4AP68366 448 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 PCLAFQ15004 111 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 MSMPQ1L6U9 139 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 ARHGAP11BQ3KRB8 267 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 XKR7Q5GH72 579 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 CFAP157Q5JU67 520 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 C6orf136Q5SQH8 315 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 ANKRD16Q6P6B7 361 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 EMBQ6PCB8 327 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 CASP12Q6UXS9 341 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 DEF8Q6ZN54 512 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TUBA1AQ71U36 451 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 R3HCC1LQ7Z5L2 792 aaKnown RBP8.08□□□□□ -1.12
VCL-204ENST00000472585 GLCCI1Q86VQ1 547 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 CLECL1Q8IZS7 167 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 C1orf162Q8NEQ5 155 aaPredicted RBP8.08□□□□□ -1.12
VCL-204ENST00000472585 TWIST2Q8WVJ9 160 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 CNOT9Q92600 299 aaKnown RBP8.08□□□□□ -1.12
VCL-204ENST00000472585 SNX18Q96RF0 628 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 DOK1Q99704 481 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 C1orf50Q9BV19 199 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 ZNF747Q9BV97 191 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 ZNF350Q9GZX5 532 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 SAP130Q9H0E3 1048 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TSPYL1Q9H0U9 437 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 NELFAQ9H3P2 528 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 PLK3Q9H4B4 646 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 CA10Q9NS85 328 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 AMDHD2Q9Y303 409 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 TMED5Q9Y3A6 229 aa8.08□□□□□ -1.12
VCL-204ENST00000472585 ZNF503-AS2A6NEH8 195 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 B9A039 149 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 WNT9BO14905 357 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 SCN2BO60939 215 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 GLRA3O75311 464 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 STX11O75558 287 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 ERCC1P07992 297 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 CELA3BP08861 270 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 OR12D1P0DN82 309 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 CDH2P19022 906 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 MPGP29372 298 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 IDH2P48735 452 aaKnown RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 P2RY4P51582 365 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 CDH15P55291 814 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 HILS1P60008 231 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 PRPS1P60891 318 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 NAA20P61599 178 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 RIN1Q13671 783 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 EFNB3Q15768 340 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 SPDYE7PQ495Y7 208 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 IL23RQ5VWK5 629 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 HIST2H2BDQ6DRA6 164 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 VHLLQ6RSH7 139 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 FRRS1Q6ZNA5 592 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 EIF3MQ7L2H7 374 aaKnown RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 SPATA19Q7Z5L4 167 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 C17orf78Q8N4C9 275 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 TMEM99Q8N816 258 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 PIGXQ8TBF5 258 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 SFXN5Q8TD22 340 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 SLC25A43Q8WUT9 341 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 TMEM234Q8WY98 164 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 BCL2L2Q92843 193 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 RAB8BQ92930 207 aa8.07□□□□□ -1.12
VCL-204ENST00000472585 AURKBQ96GD4 344 aaPredicted RBP8.07□□□□□ -1.12
VCL-204ENST00000472585 SLC38A2Q96QD8 506 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms