RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 PRKD3O94806 890 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 ZNF682O95780 498 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 SERPINA1P01009 418 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 TCN1P20061 433 aaPredicted RBP13.51□□□□□ -0.25
SNX13-205ENST00000471744 ASCL1P50553 236 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 CTBP2P56545 445 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 OR2B6P58173 313 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 NPTX1Q15818 432 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 DNAL1Q4LDG9 190 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 IFI44LQ53G44 452 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 C1orf140Q5VVS0 124 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 PLXDC2Q6UX71 529 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 FKBP9P1Q75LS8 142 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 FAM214BQ7L5A3 538 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 PIGXQ8TBF5 258 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 RNF217Q8TC41 542 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 ADAMTS16Q8TE57 1224 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 WFDC6Q9BQY6 131 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 NAA11Q9BSU3 229 aaPredicted RBP13.51□□□□□ -0.25
SNX13-205ENST00000471744 TMEM43Q9BTV4 400 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 TAS2R1Q9NYW7 299 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 FOXD3Q9UJU5 478 aaPredicted RBP13.51□□□□□ -0.25
SNX13-205ENST00000471744 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 SNX13Q9Y5W8 968 aa13.51□□□□□ -0.25
SNX13-205ENST00000471744 FREM1Q5H8C1 2179 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 A1L4Q6 167 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 ZC3H12DA2A288 527 aaKnown RBP13.5□□□□□ -0.25
SNX13-205ENST00000471744 LIPT2A6NK58 231 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 CPSF4LA6NMK7 179 aaKnown RBP13.5□□□□□ -0.25
SNX13-205ENST00000471744 PRSS44E7EML9 344 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 CYTIPO60759 359 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 TNFSF13O75888 250 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 ATP5HO75947 161 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 OR5F1O95221 314 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 CLDN1O95832 211 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 IFNW1P05000 195 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 THRBP10828 461 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 NCK1P16333 377 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 RASSF2P50749 326 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 CDH12P55289 794 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 TAS2R41P59536 307 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 FOXF2Q12947 444 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 MFSD13AQ14CX5 517 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 PDK3Q15120 406 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 GUSBP1Q15486 140 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 FBXL19-AS1Q494R0 122 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 PAQR6Q6TCH4 344 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 DEF8Q6ZN54 512 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 LIX1LQ8IVB5 337 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 CNEP1R1Q8N9A8 125 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 RELL2Q8NC24 303 aaPredicted RBP13.5□□□□□ -0.25
SNX13-205ENST00000471744 OR4D11Q8NGI4 311 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 OR6K3Q8NGY3 331 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 OR6S1Q8NH40 331 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 MFSD8Q8NHS3 518 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 ROBO4Q8WZ75 1007 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 POP5Q969H6 163 aaKnown RBP13.5□□□□□ -0.25
SNX13-205ENST00000471744 HSH2DQ96JZ2 352 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 NSMCE2Q96MF7 247 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 PRR14Q9BWN1 585 aa13.5□□□□□ -0.25
SNX13-205ENST00000471744 DCAF13Q9NV06 445 aaKnown RBP13.5□□□□□ -0.25
SNX13-205ENST00000471744 PLEKHB1Q9UF11 243 aaPredicted RBP13.5□□□□□ -0.25
SNX13-205ENST00000471744 TRAV36DV7A0A075B6V5 113 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 MSTNO14793 375 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 SMAD9O15198 467 aaKnown RBP13.49□□□□□ -0.25
SNX13-205ENST00000471744 IMPDH2P12268 514 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 GTF2E2P29084 291 aaKnown RBP13.49□□□□□ -0.25
SNX13-205ENST00000471744 PEX19P40855 299 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 KIR2DL2P43627 348 aaPredicted RBP13.49□□□□□ -0.25
SNX13-205ENST00000471744 OR1E2P47887 323 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 CEACAM7Q14002 265 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 CDSNQ15517 529 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 MTX3Q5HYI7 312 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 TMEM201Q5SNT2 666 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 FAM69AQ5T7M9 428 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 ABLIM2Q6H8Q1 611 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 VTCN1Q7Z7D3 282 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 RBM45Q8IUH3 476 aaKnown RBP13.49□□□□□ -0.25
SNX13-205ENST00000471744 FAM156AQ8NDB6 213 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 ABHD3Q8WU67 409 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 PRRC1Q96M27 445 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 SLC19A3Q9BZV2 496 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 UCK2Q9BZX2 261 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 BCO1Q9HAY6 547 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 JKAMPQ9P055 326 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 EMC3Q9P0I2 261 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 ACTR3BQ9P1U1 418 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 KLHL13Q9P2N7 655 aa13.49□□□□□ -0.25
SNX13-205ENST00000471744 ANKHD1Q8IWZ3 2542 aaKnown RBP13.48□□□□□ -0.25
SNX13-205ENST00000471744 NKX2-6A6NCS4 301 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 ZNF724A8MTY0 619 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 EEF1E1-BLOC1S5C9J1V9 151 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 GPR171O14626 319 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 ARPC2O15144 300 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 GYG2O15488 501 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 EEF1E1O43324 174 aaKnown RBP13.48□□□□□ -0.25
SNX13-205ENST00000471744 FZD7O75084 574 aa13.48□□□□□ -0.25
SNX13-205ENST00000471744 STAMBPO95630 424 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms