RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 C1orf140Q5VVS0 124 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 C3orf33Q6P1S2 294 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 CASP12Q6UXS9 341 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 Q6ZPB1 254 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-203ENST00000470339 CCDC71Q8IV32 467 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-203ENST00000470339 SULF2Q8IWU5 870 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 SPACA3Q8IXA5 215 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 OR8D4Q8NGM9 314 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 OR13C2Q8NGS9 318 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 RHOXF1Q8NHV9 184 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 FAM81AQ8TBF8 368 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 FANK1Q8TC84 345 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 HDAC2Q92769 488 aaKnown RBP13.68□□□□□ -0.22
COL4A5-203ENST00000470339 SCMH1Q96GD3 660 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 JSRP1Q96MG2 331 aaPredicted RBP13.68□□□□□ -0.22
COL4A5-203ENST00000470339 TNFRSF13CQ96RJ3 184 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 TSSK6Q9BXA6 273 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 PLA2G12AQ9BZM1 189 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 OR52D1Q9H346 318 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 UBQLN3Q9H347 655 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 TBC1D23Q9NUY8 699 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 DKKL1Q9UK85 242 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 MYRFQ9Y2G1 1151 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 HIF3AQ9Y2N7 669 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 PCDHGB5Q9Y5G0 923 aa13.68□□□□□ -0.22
COL4A5-203ENST00000470339 APC2O95996 2303 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 A0A0G2JMM0 328 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 A0A1W2PPB8 328 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 A0A1W2PRS3 328 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 KIR3DP1A8MWS1 328 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 LINC01387J3KSC0 135 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 EFNA2O43921 213 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 FZD7O75084 574 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 NDUFB2O95178 105 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 WISP1O95388 367 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 F10P00742 488 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 BGLAPP02818 100 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 CCNA2P20248 432 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 TNFSF10P50591 281 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 FXYD6P3P58550 94 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 EFNB1P98172 346 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 MYBPC1Q00872 1141 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 LTBQ06643 244 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 RBM48Q5RL73 367 aaKnown RBP13.67□□□□□ -0.22
COL4A5-203ENST00000470339 SLC25A30Q5SVS4 291 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 C6orf141Q5SZD1 244 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 TMEM236Q5W0B7 351 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 POMZP3Q6PJE2 187 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 MAMDC2Q7Z304 686 aaPredicted RBP13.67□□□□□ -0.22
COL4A5-203ENST00000470339 ENTHD1Q8IYW4 607 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 TMEM178AQ8NBL3 297 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 OR2T33Q8NG76 320 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 OR8J1Q8NGP2 316 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 MFSD8Q8NHS3 518 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 SAMD8Q96LT4 415 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 SLC38A2Q96QD8 506 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 NPAS1Q99742 590 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 PIGQQ9BRB3 760 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 PTDSS2Q9BVG9 487 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 POLDIP3Q9BY77 421 aaKnown RBP13.67□□□□□ -0.22
COL4A5-203ENST00000470339 OR2B2Q9GZK3 357 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 NDEL1Q9GZM8 345 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL4A5-203ENST00000470339 ZNF696Q9H7X3 374 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 MCCC2Q9HCC0 563 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 QPCTLQ9NXS2 382 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 B4GALT7Q9UBV7 327 aa13.67□□□□□ -0.22
COL4A5-203ENST00000470339 PCDHGA9Q9Y5G4 932 aaKnown RBP13.67□□□□□ -0.22
COL4A5-203ENST00000470339 ZC3H12DA2A288 527 aaKnown RBP13.66□□□□□ -0.22
COL4A5-203ENST00000470339 LYNP07948 512 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 GABRB1P18505 474 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 SLC6A6P31641 620 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 GRK5P34947 590 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 RPS5P46782 204 aaKnown RBP13.66□□□□□ -0.22
COL4A5-203ENST00000470339 UCNP55089 124 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 GPR85P60893 370 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 CTU2Q2VPK5 515 aaKnown RBP13.66□□□□□ -0.22
COL4A5-203ENST00000470339 PGGHGQ32M88 737 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 ACSM5Q6NUN0 579 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 IGFL3Q6UXB1 125 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 DPY19L2P2Q6ZN68 376 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 PTCHD4Q6ZW05 846 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 LNX2Q8N448 690 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 LRRC17Q8N6Y2 441 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 OR51A7Q8NH64 312 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 TM9SF4Q92544 642 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 ZNF566Q969W8 418 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 MOGAT1Q96PD6 335 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 GPX7Q96SL4 187 aaPredicted RBP13.66□□□□□ -0.22
COL4A5-203ENST00000470339 ZNF226Q9NYT6 803 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 RNF6Q9Y252 685 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 TRAPPC4Q9Y296 219 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 HDGFL3Q9Y3E1 203 aa13.66□□□□□ -0.22
COL4A5-203ENST00000470339 PCDHGB7Q9Y5F8 929 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms