RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 RNF145Q96MT1 663 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 NPAS1Q99742 590 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 ARHGDIGQ99819 225 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 UTP23Q9BRU9 249 aaKnown RBP4.29□□□□□ -1.72
SF3B1-208ENST00000470268 SPATA5L1Q9BVQ7 753 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 CHID1Q9BWS9 393 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 ANGPTL4Q9BY76 406 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 TBL1XR1Q9BZK7 514 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 HOXD1Q9GZZ0 328 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 IL1RAPQ9NPH3 570 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 CTPS2Q9NRF8 586 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 ADPRHL2Q9NX46 363 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 NDUFAF4Q9P032 175 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 RPS6KA6Q9UK32 745 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 FBXL2Q9UKC9 423 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 ICAM5Q9UMF0 924 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 SAMD4AQ9UPU9 718 aaKnown RBP4.29□□□□□ -1.72
SF3B1-208ENST00000470268 IFT52Q9Y366 437 aa4.29□□□□□ -1.72
SF3B1-208ENST00000470268 DPPA5A6NC42 116 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 SYT5O00445 386 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 TP53I11O14683 189 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF264O43296 627 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 HS6ST1O60243 411 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 TRIM3O75382 744 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-208ENST00000470268 SLC25A12O75746 678 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 PRSS23O95084 383 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 IFNA14P01570 189 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 GPIP06744 558 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 GNAO1P09471 354 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 RFPL3SP0C7P2 107 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 UBL4AP11441 157 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 CD53P19397 219 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 HTR2AP28223 471 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 RYKP34925 604 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 TNFSF10P50591 281 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 UCNP55089 124 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 FOXO1Q12778 655 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 IFI44LQ53G44 452 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 IRAK1BP1Q5VVH5 260 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 TMEM154Q6P9G4 183 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ARSKQ6UWY0 536 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 RTL4Q6ZR62 310 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 CARM1Q86X55 608 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 PRR18Q8N4B5 295 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 CBR4Q8N4T8 237 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF527Q8NB42 609 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 RASSF5Q8WWW0 418 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 EME1Q96AY2 570 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 SLC47A1Q96FL8 570 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 CNBD2Q96M20 576 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 GNRHR2Q96P88 292 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ZNF300Q96RE9 604 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-208ENST00000470268 SECISBP2Q96T21 854 aaKnown RBP4.28□□□□□ -1.72
SF3B1-208ENST00000470268 BARD1Q99728 777 aaKnown RBP4.28□□□□□ -1.72
SF3B1-208ENST00000470268 OSBPL11Q9BXB4 747 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 METTL7AQ9H8H3 244 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 NTN4Q9HB63 628 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 KLHL1Q9NR64 748 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 AGPAT4Q9NRZ5 378 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-208ENST00000470268 VNN3Q9NY84 501 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 KLRF1Q9NZS2 232 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 MED11Q9P086 117 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 C6orf203Q9P0P8 240 aaPredicted RBP4.28□□□□□ -1.72
SF3B1-208ENST00000470268 RHCGQ9UBD6 479 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ANAPC2Q9UJX6 822 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 BAG5Q9UL15 447 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 OAZ3Q9UMX2 235 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 A4GNTQ9UNA3 340 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 LRCH1Q9Y2L9 728 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 WIF1Q9Y5W5 379 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 ACACAQ13085 2346 aa4.28□□□□□ -1.72
SF3B1-208ENST00000470268 IGLV3-32A0A0A0MS00 114 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 TMEM8BA6NDV4 472 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 LRRC3CA6NJW4 275 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 HCRTR2O43614 444 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 WISP2O76076 250 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 STAMBPO95630 424 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 IFNW1P05000 195 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 LYNP07948 512 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 SP1P08047 785 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 RAP2AP10114 183 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 UMPSP11172 480 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 UQCRBP14927 111 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 PI3P19957 117 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 PSMA4P25789 261 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 RFC3P40938 356 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 RPS6KA3P51812 740 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 RGS8P57771 180 aaPredicted RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ARG2P78540 354 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 CHRNB3Q05901 458 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 C17orf67Q0P5P2 114 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 EPS8Q12929 822 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 SNTA1Q13424 505 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 GANABQ14697 944 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 COL28A1Q2UY09 1125 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 FAM98BQ52LJ0 330 aaKnown RBP4.28□□□□□ -1.73
SF3B1-208ENST00000470268 ZFP1Q6P2D0 407 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 FAM180AQ6UWF9 173 aa4.28□□□□□ -1.73
SF3B1-208ENST00000470268 IGFL3Q6UXB1 125 aa4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms