RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SPTA1P02549 2419 aa5.66□□□□□ -1.5
PTCD3-208ENST00000469585 SCN2AQ99250 2005 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 MYO1GB0I1T2 1018 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 E9PBE3 544 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 NPIPA5E9PKD4 350 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PLOD2O00469 737 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 ITM2AO43736 263 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 TBX19O60806 448 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SLC22A3O75751 556 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 TRAPPC6AO75865 159 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SORBS2O94875 1100 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 OR6B1O95007 311 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 KRT75O95678 551 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 AK1P00568 194 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 IFNA2P01563 188 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 IL1AP01583 271 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 IGKV3-11P04433 115 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 NCF2P19878 526 aaPredicted RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 DRD5P21918 477 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 GDF1P27539 372 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 LCN1P31025 176 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 CCT3P49368 545 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SMSP52788 366 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 CLDN8P56748 225 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PPIAP62937 165 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 EFNB1P98172 346 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SNTA1Q13424 505 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SLC10A1Q14973 349 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 EXOSC7Q15024 291 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 NNATQ16517 81 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 XKR7Q5GH72 579 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 FAM69AQ5T7M9 428 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PXDC1Q5TGL8 231 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 ARHGAP11AQ6P4F7 1023 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 C1QL2Q7Z5L3 287 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 ARMC8Q8IUR7 673 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 MISPQ8IVT2 679 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 C9orf40Q8IXQ3 194 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 ZDHHC23Q8IYP9 409 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 FBXW8Q8N3Y1 598 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 MDS2Q8NDY4 140 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 DNAAF1Q8NEP3 725 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 OR4K17Q8NGC6 315 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 OR1J4Q8NGS1 313 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SFXN5Q8TD22 340 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PSMF1Q92530 271 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 OMA1Q96E52 524 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 AMDHD1Q96NU7 426 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SIGLEC12Q96PQ1 595 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 OR52E6Q96RD3 313 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PANX1Q96RD7 426 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 SH3GL2Q99962 352 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 OSBPL11Q9BXB4 747 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 LIN28AQ9H9Z2 209 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 FOLH1BQ9HBA9 442 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 TCF7L2Q9NQB0 619 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 ASF1BQ9NVP2 202 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 THUMPD1Q9NXG2 353 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 MAT2BQ9NZL9 334 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PEMTQ9UBM1 199 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 BAIAP2L1Q9UHR4 511 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 DKKL1Q9UK85 242 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 ACAD8Q9UKU7 415 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 NPIPA1Q9UND3 350 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 PTGDR2Q9Y5Y4 395 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 USH1CQ9Y6N9 552 aa5.65□□□□□ -1.5
PTCD3-208ENST00000469585 DSPP15924 2871 aaKnown RBP5.65□□□□□ -1.5
PTCD3-208ENST00000469585 COL6A6A6NMZ7 2263 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 CACNA1GO43497 2377 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 TRGV8A0A0C4DH27 118 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 A0A0G2JND7 137 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 PRSS51A0A1B0GVH4 220 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 OR6C70A6NIJ9 312 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 K7EM74 188 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 GTPBP1O00178 669 aaKnown RBP5.64□□□□□ -1.51
PTCD3-208ENST00000469585 DYNC1I1O14576 645 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 RFXANKO14593 260 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 TSPAN4O14817 238 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 BCKDKO14874 412 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 SNNO75324 88 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-208ENST00000469585 NDUFB8O95169 186 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 NUDT14O95848 222 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 G6PDP11413 515 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 UQCRBP14927 111 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 TNFRSF1BP20333 461 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 GPX3P22352 226 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 PPIBP23284 216 aaKnown RBP5.64□□□□□ -1.51
PTCD3-208ENST00000469585 ME2P23368 584 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 GABRA3P34903 492 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 KHKP50053 298 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 ZNF41P51814 821 aaPredicted RBP5.64□□□□□ -1.51
PTCD3-208ENST00000469585 PNLIPRP2P54317 469 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 UFM1P61960 85 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 RCAN2Q14206 197 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 PTGR1Q14914 329 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 MAPRE2Q15555 327 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 LTB4RQ15722 352 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 NTRK2Q16620 822 aa5.64□□□□□ -1.51
PTCD3-208ENST00000469585 UGT3A2Q3SY77 523 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms