RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 WISP3O95389 354 aaPredicted RBP3.16□□□□□ -1.9
XRN1-207ENST00000468894 PCCBP05166 539 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 NPIPA8P0DM63 369 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 CRISP2P16562 243 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 POLR2EP19388 210 aaKnown RBP3.16□□□□□ -1.9
XRN1-207ENST00000468894 SHMT2P34897 504 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 HTD2P86397 168 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 CNTN2Q02246 1040 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 DMTNQ08495 405 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 RIPK1Q13546 671 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 SLC25A52Q3SY17 297 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 AFTPHQ6ULP2 937 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 ZFP2Q6ZN57 461 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 MOB3BQ86TA1 216 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 MFSD6LQ8IWD5 586 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 OR10G3Q8NGC4 313 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 TMEM158Q8WZ71 300 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 ARPC1AQ92747 370 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 NIPSNAP3BQ9BS92 247 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 OR11A1Q9GZK7 315 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 VCXQ9H320 206 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 SLC17A5Q9NRA2 495 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 AATFQ9NY61 560 aaKnown RBP eCLIP3.16□□□□□ -1.9
XRN1-207ENST00000468894 NPIPA1Q9UND3 350 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 ATP6V0A2Q9Y487 856 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 ASTN1O14525 1302 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 SH3TC1Q8TE82 1336 aa3.16□□□□□ -1.9
XRN1-207ENST00000468894 FAM25EA8MYX2 175 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 TAPBPO15533 448 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 MFN2O95140 757 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 LRATO95237 230 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 STAMBPO95630 424 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 GZMAP12544 262 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 ICAM2P13598 275 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 ZNF44P15621 663 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 DESP17661 470 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 NPR2P20594 1047 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 CXCR2P25025 360 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 CA8P35219 290 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 PRPHP41219 470 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 KPNA2P52292 529 aaKnown RBP3.15□□□□□ -1.91
XRN1-207ENST00000468894 KRTAP10-1P60331 282 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 PFN3P60673 137 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 TSPO2Q5TGU0 170 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 NCR3LG1Q68D85 454 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 PYHIN1Q6K0P9 492 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 OR2L13Q8N349 312 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 FTMTQ8N4E7 242 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 OR9G1Q8NH87 305 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 CCDC110Q8TBZ0 833 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 TIMD4Q96H15 378 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 COQ10BQ9H8M1 238 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 EML4Q9HC35 981 aaKnown RBP3.15□□□□□ -1.91
XRN1-207ENST00000468894 CYTL1Q9NRR1 136 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 AURKCQ9UQB9 309 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 ATAD2BQ9ULI0 1458 aa3.15□□□□□ -1.91
XRN1-207ENST00000468894 NBR2O15453 112 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 ZNF324O75467 553 aaPredicted RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 IGHG4P01861 327 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 GIPP09681 153 aaPredicted RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 MDH1P40925 334 aaKnown RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 P2RY1P47900 373 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 SUCLG1P53597 346 aaKnown RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 MRPL28Q13084 256 aaKnown RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 PTGES3Q15185 160 aaKnown RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 PSG5Q15238 335 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 TAF7Q15545 349 aaPredicted RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 TMIGD1Q6UXZ0 262 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 GDPD3Q7L5L3 318 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 LINC01551Q86U37 167 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 ZNF540Q8NDQ6 660 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 IPMKQ8NFU5 416 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 NPBQ8NG41 125 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 FANK1Q8TC84 345 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 ZNF75CPQ92670 426 aaPredicted RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 P2RY13Q9BPV8 354 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 EDEM2Q9BV94 578 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 FOLH1BQ9HBA9 442 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 IL36GQ9NZH8 169 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 CGNQ9P2M7 1197 aaKnown RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 NUFIP1Q9UHK0 495 aaKnown RBP3.14□□□□□ -1.91
XRN1-207ENST00000468894 STAP1Q9ULZ2 295 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 N6AMT1Q9Y5N5 214 aa3.14□□□□□ -1.91
XRN1-207ENST00000468894 IGLV4-69A0A075B6H9 119 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 SYNJ2BP-COX16A0A087WUM0 186 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 A0A096LNJ9 63 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 BTN3A3O00478 584 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 DLGAP1O14490 977 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 GUCA1CO95843 209 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 SFTPCP11686 197 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 MAGP20916 626 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 ANXA13P27216 316 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 KIR2DS4P43632 304 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 CRISP3P54108 245 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 POLR2FP61218 127 aaKnown RBP3.13□□□□□ -1.91
XRN1-207ENST00000468894 HERVK_113P61574 105 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 GRB7Q14451 532 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 USH1GQ495M9 461 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 BCL7AQ4VC05 210 aa3.13□□□□□ -1.91
XRN1-207ENST00000468894 OR2G6Q5TZ20 316 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms