RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMC4-209ENST00000468653 HRH3Q9Y5N1 445 aa17.21■□□□□ 0.35
SMC4-209ENST00000468653 RIIAD1A6NNX1 92 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 FAM47E-STBD1D6RA91 191 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 BLOC1S5-TXNDC5H3BN57 136 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 SEC14L2O76054 403 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 HK1P19367 917 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 APOBEC1P41238 236 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 LTBQ06643 244 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 GXYLT1Q4G148 440 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 ACER2Q5QJU3 275 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 ARHGAP11AQ6P4F7 1023 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 DPY19L2P2Q6ZN68 376 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 CXXC5Q7LFL8 322 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 IGFN1Q86VF2 1251 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 CPOQ8IVL8 374 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 OR2M3Q8NG83 312 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 STK35Q8TDR2 534 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 PAQR8Q8TEZ7 354 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 FN3KQ9H479 309 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 FKRPQ9H9S5 495 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 COMMD3-BMI1R4GMX3 469 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 ZC3H12DA2A288 527 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 MCIDASD6RGH6 385 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 CCL3P10147 92 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 CDH11P55287 796 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 RPS4XP62701 263 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 INPP5JQ15735 1006 aaPredicted RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 AADACL4Q5VUY2 407 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 GPR107Q5VW38 600 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 C1QL3Q5VWW1 255 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 NXNL2Q5VZ03 156 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 JMJD6Q6NYC1 403 aaPredicted RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 C5orf46Q6UWT4 87 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 DTX1Q86Y01 620 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 FCGR1BQ92637 280 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 TMEM80Q96HE8 168 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 SGCZQ96LD1 299 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 ANGPTL4Q9BY76 406 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 PTGES2Q9H7Z7 377 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 ASCL3Q9NQ33 180 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 HINT3Q9NQE9 182 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 WARS2Q9UGM6 360 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 RSL24D1Q9UHA3 163 aaKnown RBP17.2■□□□□ 0.34
SMC4-209ENST00000468653 ZNF229Q9UJW7 825 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 IER3IP1Q9Y5U9 82 aa17.2■□□□□ 0.34
SMC4-209ENST00000468653 FAM183AA6NL82 134 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 IFNGP01579 166 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 ASAH2BP0C7U1 165 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 PSMB9P28065 219 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 AQP2P41181 271 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 FOXF1Q12946 379 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 TGIF1Q15583 401 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 TBCEQ15813 527 aaPredicted RBP17.19■□□□□ 0.34
SMC4-209ENST00000468653 CNPY1Q3B7I2 92 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 ANKDD1AQ495B1 522 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 KLHL22Q53GT1 634 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 DCAF10Q5QP82 559 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 ZNF468Q5VIY5 522 aaPredicted RBP17.19■□□□□ 0.34
SMC4-209ENST00000468653 C1orf140Q5VVS0 124 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 PLBD1Q6P4A8 553 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 TMPRSS7Q7RTY8 843 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 NANOGNBQ7Z5D8 188 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 WDSUB1Q8N9V3 476 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 MOSPD2Q8NHP6 518 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 SLC25A36Q96CQ1 311 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 RNFT2Q96EX2 444 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 DNAJA3Q96EY1 480 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 FRMD6Q96NE9 622 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 NPAS1Q99742 590 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 TAPBPLQ9BX59 468 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 NDEL1Q9GZM8 345 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 ANKRD10Q9NXR5 420 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 CHRNA9Q9UGM1 479 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 FBXL2Q9UKC9 423 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 HIF3AQ9Y2N7 669 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 MPDZO75970 2070 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 CUL9Q8IWT3 2517 aa17.19■□□□□ 0.34
SMC4-209ENST00000468653 WDFY3Q8IZQ1 3526 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 PCSK5Q92824 1860 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 IRGMA1A4Y4 181 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 PRR23D1E9PI22 279 aaPredicted RBP17.18■□□□□ 0.34
SMC4-209ENST00000468653 AHSA1O95433 338 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 MT-ATP6P00846 226 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 BGLAPP02818 100 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 PRR23D2P0DMB1 279 aaPredicted RBP17.18■□□□□ 0.34
SMC4-209ENST00000468653 ZNF3P17036 446 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 MTNR1AP48039 350 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 GP2P55259 537 aaKnown RBP17.18■□□□□ 0.34
SMC4-209ENST00000468653 DLX5P56178 289 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 PLPPR5Q32ZL2 321 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 FAM69AQ5T7M9 428 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 MAMDC2Q7Z304 686 aaPredicted RBP17.18■□□□□ 0.34
SMC4-209ENST00000468653 PLCZ1Q86YW0 608 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 GID4Q8IVV7 300 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 FADS6Q8N9I5 356 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 MRGPRX4Q96LA9 322 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 CDCA4Q9BXL8 241 aa17.18■□□□□ 0.34
SMC4-209ENST00000468653 OR11A1Q9GZK7 315 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms