RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 CLDN24A6NM45 220 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 B4DSR2 109 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 IGLV1-44P01699 117 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 NEFHP12036 1026 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 FKBP2P26885 142 aaKnown RBP16.15■□□□□ 0.18
LINC00888-201ENST00000468380 HBA1P69905 142 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 PTGR1Q14914 329 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 ADRM1Q16186 407 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 LSM12Q3MHD2 195 aaKnown RBP16.15■□□□□ 0.18
LINC00888-201ENST00000468380 UGT3A2Q3SY77 523 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 KANK2Q63ZY3 851 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 LINGO2Q7L985 606 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 AAED1Q7RTV5 226 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 C6orf120Q7Z4R8 191 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 MYPOPQ86VE0 399 aaPredicted RBP16.15■□□□□ 0.18
LINC00888-201ENST00000468380 KRTCAP2Q8N6L1 136 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 NAA11Q9BSU3 229 aaPredicted RBP16.15■□□□□ 0.18
LINC00888-201ENST00000468380 TMEM45AQ9NWC5 275 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 HIF1ANQ9NWT6 349 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 SPEF1Q9Y4P9 236 aa16.15■□□□□ 0.18
LINC00888-201ENST00000468380 TMED7-TICAM2A0A0A6YYA0 188 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 TMEM233B4DJY2 109 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 PLIN3O60664 434 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 EIF1BO60739 113 aaKnown RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 CELA3BP08861 270 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 DDX5P17844 614 aaKnown RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 PCMT1P22061 227 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 SLC1A3P43003 542 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 IDH2P48735 452 aaKnown RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 PDLIM3Q53GG5 364 aaPredicted RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 TYW3Q6IPR3 259 aaKnown RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 PAQR6Q6TCH4 344 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 UGT2A3Q6UWM9 527 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 SYT10Q6XYQ8 523 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 THSD4Q6ZMP0 1018 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 C1orf229Q6ZS94 237 aaPredicted RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 SPATA21Q7Z572 469 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 GLCCI1Q86VQ1 547 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 TMEM99Q8N816 258 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 POMGNT2Q8NAT1 580 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 NUP37Q8NFH4 326 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 OR4F15Q8NGB8 312 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 OR9K2Q8NGE7 335 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 ZNF418Q8TF45 676 aaPredicted RBP16.14■□□□□ 0.17
LINC00888-201ENST00000468380 MOAP1Q96BY2 351 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 SAP130Q9H0E3 1048 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 NELFAQ9H3P2 528 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 OSGIN1Q9UJX0 560 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 PCDHB10Q9UN67 800 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 TMED7Q9Y3B3 224 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 PCDHB14Q9Y5E9 798 aa16.14■□□□□ 0.17
LINC00888-201ENST00000468380 A0A096LPE4 126 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 A0A1W2PPZ6 126 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 AP3D1O14617 1153 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 WNT9BO14905 357 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 CFLARO15519 480 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 AK1P00568 194 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 ABHD2P08910 425 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 ADRA2AP08913 450 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 CPA3P15088 417 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 NPR2P20594 1047 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 KHKP50053 298 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 HILS1P60008 231 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 PRR31Q5SQ13 230 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 CDK20Q8IZL9 346 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 TMEM186Q96B77 213 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 GATA5Q9BWX5 397 aaPredicted RBP16.13■□□□□ 0.17
LINC00888-201ENST00000468380 ZNF442Q9H7R0 627 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 LPAR2Q9HBW0 351 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 TBK1Q9UHD2 729 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 SLC35A3Q9Y2D2 325 aa16.13■□□□□ 0.17
LINC00888-201ENST00000468380 ARPC4-TTLL3A0A0A6YYG9 625 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 DUXAA6NLW8 204 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 ZNF208O43345 1280 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 PEX11AO75192 247 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 GLRA3O75311 464 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 AKR7A3O95154 331 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 AVPP01185 164 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 RPL3P39023 403 aaKnown RBP16.12■□□□□ 0.17
LINC00888-201ENST00000468380 ARFIP2P53365 341 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 ETF1P62495 437 aaKnown RBP16.12■□□□□ 0.17
LINC00888-201ENST00000468380 KCNJ10P78508 379 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 FUT5Q11128 374 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 C3orf36Q3SXR2 165 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 AWAT1Q58HT5 328 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 OTUD3Q5T2D3 398 aaPredicted RBP16.12■□□□□ 0.17
LINC00888-201ENST00000468380 USP43Q70EL4 1123 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 RIMKLAQ8IXN7 391 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 DDIASQ8IXT1 998 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 C17orf53Q8N3J3 647 aaPredicted RBP16.12■□□□□ 0.17
LINC00888-201ENST00000468380 CLDND2Q8NHS1 167 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 CNOT9Q92600 299 aaKnown RBP16.12■□□□□ 0.17
LINC00888-201ENST00000468380 C1orf50Q9BV19 199 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 RACGAP1Q9H0H5 632 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 OR51I1Q9H343 314 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 TPK1Q9H3S4 243 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 FBXO9Q9UK97 447 aaPredicted RBP16.12■□□□□ 0.17
LINC00888-201ENST00000468380 PCDHGB4Q9UN71 923 aa16.12■□□□□ 0.17
LINC00888-201ENST00000468380 TMEM114B3SHH9 223 aa16.11■□□□□ 0.17
LINC00888-201ENST00000468380 TRIM77I1YAP6 450 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms