RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 SEMA6AQ9H2E6 1030 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PRORYQ9H606 182 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 EVA1AQ9H8M9 152 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 AGPAT4Q9NRZ5 378 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 KLF13Q9Y2Y9 288 aaPredicted RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 TESMINQ9Y4I5 508 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 TRAV17A0A0B4J275 112 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ANKUB1A6NFN9 424 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 LRRC3CA6NJW4 275 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 KPNA4O00629 521 aaPredicted RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 FMO6PO60774 539 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 WISP1O95388 367 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 THY1P04216 161 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 RFPL3SP0C7P2 107 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 SMIM18P0DKX4 95 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 UQCRBP14927 111 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 CDH2P19022 906 aaPredicted RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PGCP20142 388 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 FASP25445 335 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ELAVL4P26378 380 aaKnown RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 MSX1P28360 303 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 RRM2P31350 389 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 SLC6A8P48029 635 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 COPZ1P61923 177 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 SCRN3Q0VDG4 424 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 OR2T5Q6IEZ7 315 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 HMBOX1Q6NT76 420 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 C19orf48Q6RUI8 117 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PLEKHM3Q6ZWE6 761 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 AMIGO2Q86SJ2 522 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF605Q86T29 641 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 CADM2Q8N3J6 435 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 OR2M3Q8NG83 312 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 OR2T29Q8NH02 315 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 CNTNAP3BQ96NU0 1288 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF347Q96SE7 839 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 NPAS1Q99742 590 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PKP2Q99959 881 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF559Q9BR84 538 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 CNTNAP3Q9BZ76 1288 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PTGES2Q9H7Z7 377 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 NMNAT1Q9HAN9 279 aaPredicted RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 TAS2R10Q9NYW0 307 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 RSL24D1Q9UHA3 163 aaKnown RBP6.23□□□□□ -1.41
SCAF4-204ENST00000467731 PCDHGB7Q9Y5F8 929 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 U3KQV3 271 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 RELNP78509 3460 aa6.23□□□□□ -1.41
SCAF4-204ENST00000467731 A0A0B4J2E0 115 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 A0A1B0GWA3 101 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 A0A1B0GX12 115 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 KLRC4-KLRK1H3BQV0 150 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 GNGT2O14610 69 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 DEAF1O75398 565 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 CBR3O75828 277 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 BAG2O95816 211 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 FCGR1AP12314 374 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 MEOX1P50221 254 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF41P51814 821 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 CDH12P55289 794 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SUMO3P55854 103 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 FOXK2Q01167 660 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SPIBQ01892 262 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 QPRTQ15274 297 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 FAM209BQ5JX69 171 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 BEND4Q6ZU67 534 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 CYP4Z1Q86W10 505 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 PQLC1Q8N2U9 271 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 RBMXL3Q8N7X1 1067 aaKnown RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 OR52J3Q8NH60 311 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SLC41A3Q96GZ6 507 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 MFRPQ9BY79 579 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 TRIM2Q9C040 744 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 TMEM27Q9HBJ8 222 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ZFP64Q9NPA5 681 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF71Q9NQZ8 489 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 VNN3Q9NY84 501 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 NUP50Q9UKX7 468 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SLC7A7Q9UM01 511 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 BOKQ9UMX3 212 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 B3GNT3Q9Y2A9 372 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 PCDHGB6Q9Y5F9 930 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 RP1L1Q8IWN7 2480 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 TRAPPC13A5PLN9 417 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 FAAHO00519 579 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ADAMDEC1O15204 470 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ANPEPP15144 967 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 PTNP21246 168 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SLC1A3P43003 542 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 AP2S1P53680 142 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 SELENBP1Q13228 472 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF169Q14929 603 aaPredicted RBP6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ATP6AP1Q15904 470 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 TRIM16LQ309B1 348 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ALG10BQ5I7T1 473 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 WBP2NLQ6ICG8 309 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ZNF613Q6PF04 617 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 Q6ZS92 163 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 ASB18Q6ZVZ8 466 aa6.22□□□□□ -1.41
SCAF4-204ENST00000467731 GDF7Q7Z4P5 450 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms