RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 CNEP1R1Q8N9A8 125 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 VANGL1Q8TAA9 524 aaPredicted RBP12.15□□□□□ -0.46
SSBP1-206ENST00000467681 ABHD3Q8WU67 409 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 LZICQ8WZA0 190 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 RNASE6Q93091 150 aaKnown RBP12.15□□□□□ -0.46
SSBP1-206ENST00000467681 ZHX1-C8orf76Q96EF9 292 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 SPOCK3Q9BQ16 436 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 ENKD1Q9H0I2 346 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 PCDHAC1Q9H158 963 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
SSBP1-206ENST00000467681 PLSCR4Q9NRQ2 329 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 ADPRHL2Q9NX46 363 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 PACSIN3Q9UKS6 424 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 CLEC4AQ9UMR7 237 aa12.15□□□□□ -0.46
SSBP1-206ENST00000467681 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 SMAD9O15198 467 aaKnown RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 EIF1BO60739 113 aaKnown RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 LYPD3O95274 346 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 PLGP00747 810 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 YES1P07947 543 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 NCK1P16333 377 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 IDUAP35475 653 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 ASCL1P50553 236 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 CTBP2P56545 445 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 SIRPAP78324 504 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 EGR4Q05215 589 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 CEACAM7Q14002 265 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 PDK3Q15120 406 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 ENTPD8Q5MY95 495 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 SWT1Q5T5J6 900 aaKnown RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 VWA1Q6PCB0 445 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 CBLL1Q75N03 491 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 LSRQ86X29 649 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 RNF148Q8N7C7 305 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 RBM15BQ8NDT2 890 aaKnown RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 MFSD8Q8NHS3 518 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 DNAJA3Q96EY1 480 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 LRRC46Q96FV0 321 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 TPD52L3Q96J77 140 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 NAA11Q9BSU3 229 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 FOXD3Q9UJU5 478 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 ING1Q9UK53 422 aaPredicted RBP12.14□□□□□ -0.47
SSBP1-206ENST00000467681 EMC9Q9Y3B6 208 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 NOTCH2Q04721 2471 aa12.14□□□□□ -0.47
SSBP1-206ENST00000467681 IGKV1D-42A0A075B6H8 117 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TRAPPC13A5PLN9 417 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 ZNF724A8MTY0 619 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 EEF1E1-BLOC1S5C9J1V9 151 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 EEF1E1O43324 174 aaKnown RBP12.13□□□□□ -0.47
SSBP1-206ENST00000467681 GMNNO75496 209 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 AHSA1O95433 338 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 THY1P04216 161 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 GPIP06744 558 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 CD8BP10966 210 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 IGFBP2P18065 325 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TNFRSF1BP20333 461 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 OR1E2P47887 323 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 PCYT1AP49585 367 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 RASGEF1BQ0VAM2 473 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TMEM201Q5SNT2 666 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 PAQR6Q6TCH4 344 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 C5orf46Q6UWT4 87 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 RINLQ6ZS11 566 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TSPYL5Q86VY4 417 aaPredicted RBP12.13□□□□□ -0.47
SSBP1-206ENST00000467681 CCDC103Q8IW40 242 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TUSC5Q8IXB3 177 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 ZNF610Q8N9Z0 462 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 OR6K3Q8NGY3 331 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 FAM162AQ96A26 154 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 KTI12Q96EK9 354 aaPredicted RBP12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TAPBPLQ9BX59 468 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 GORASP2Q9H8Y8 452 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 TAS2R1Q9NYW7 299 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 KLHL9Q9P2J3 617 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 KLHL13Q9P2N7 655 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 EGFL7Q9UHF1 273 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 PROCRQ9UNN8 238 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 HCFC1P51610 2035 aa12.13□□□□□ -0.47
SSBP1-206ENST00000467681 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 CPSF4LA6NMK7 179 aaKnown RBP12.12□□□□□ -0.47
SSBP1-206ENST00000467681 ZNF814B7Z6K7 855 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 FTCDNL1E5RQL4 147 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 OR2T1O43869 369 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 SMNDC1O75940 238 aaKnown RBP eCLIP12.12□□□□□ -0.47
SSBP1-206ENST00000467681 ZNF682O95780 498 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 SERPINA1P01009 418 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 TCN1P20061 433 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-206ENST00000467681 AGTR1P30556 359 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 UQCRC1P31930 480 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 MSX2P35548 267 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-206ENST00000467681 SLC16A1P53985 500 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 OR7A5Q15622 319 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 ZNF474Q6S9Z5 364 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-206ENST00000467681 NUFIP2Q7Z417 695 aaKnown RBP12.12□□□□□ -0.47
SSBP1-206ENST00000467681 VTCN1Q7Z7D3 282 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 P3H2Q8IVL5 708 aa12.12□□□□□ -0.47
SSBP1-206ENST00000467681 ARHGAP24Q8N264 748 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms