RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TRA2BP62995 288 aaKnown RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 ACTG1P63261 375 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TUBA1BP68363 451 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 BAK1Q16611 211 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 UGT2A3Q6UWM9 527 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 SBSNQ6UWP8 590 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 PLXDC2Q6UX71 529 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 DEF8Q6ZN54 512 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TUBA1AQ71U36 451 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TMPRSS11BQ86T26 416 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GPSM1Q86YR5 675 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 CPNE9Q8IYJ1 553 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 LNX2Q8N448 690 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 SEMA6DQ8NFY4 1073 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 RAB3IL1Q8TBN0 382 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 XAGE5Q8WWM1 108 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 HSD17B8Q92506 261 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 KAT2AQ92830 837 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TANKQ92844 425 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 MSI2Q96DH6 328 aaKnown RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 RAB3IPQ96QF0 476 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GAL3ST4Q96RP7 486 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 CSF3RQ99062 836 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GPR21Q99679 349 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 FAM118BQ9BPY3 351 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 MECRQ9BV79 373 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 OSBPL11Q9BXB4 747 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TEX12Q9BXU0 123 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TRIM2Q9C040 744 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 SPNS1Q9H2V7 528 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 DENND2DQ9H6A0 471 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 METTL7AQ9H8H3 244 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 GORASP2Q9H8Y8 452 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 NHEJ1Q9H9Q4 299 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 BRF2Q9HAW0 419 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 SLC35C2Q9NQQ7 365 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 NKX1-2Q9UD57 310 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 TRMT6Q9UJA5 497 aaKnown RBP4.8□□□□□ -1.64
PTCD3-207ENST00000467273 BAG5Q9UL15 447 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 DTX4Q9Y2E6 619 aa4.8□□□□□ -1.64
PTCD3-207ENST00000467273 UQCRHLA0A096LP55 91 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 MAGEB16A2A368 324 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 XKRY2A2RUG3 117 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 CLOCKO15516 846 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ICOSLGO75144 302 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 LRATO95237 230 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TK1P04183 234 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ABCB1P08183 1280 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 C1GALT1C1LP0DN25 315 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TMEM225BP0DP42 221 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TROVE2P10155 538 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 EGR2P11161 476 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 HPGDP15428 266 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 GALP22466 123 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 GSTM5P46439 218 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 RPS3AP61247 264 aaKnown RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 HERVK_113P63132 956 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ERVK-8P63133 956 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TPM4P67936 248 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 SIRPAP78324 504 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 THOC5Q13769 683 aaKnown RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 RAB35Q15286 201 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 GALNTL6Q49A17 601 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TMEM35AQ53FP2 167 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ATG16L1Q676U5 607 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF470Q6ECI4 717 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF549Q6P9A3 640 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 CYP20A1Q6UW02 462 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ZNF793Q6ZN11 406 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 MBOAT1Q6ZNC8 495 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 USP43Q70EL4 1123 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 H1FNTQ75WM6 255 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TRABD2AQ86V40 505 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 THOC6Q86W42 341 aaKnown RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 PLCZ1Q86YW0 608 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 POMGNT2Q8NAT1 580 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 EEF1AKMT1Q8WVE0 214 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 RIT1Q92963 219 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 GMPPAQ96IJ6 420 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TSNARE1Q96NA8 513 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 SFXN2Q96NB2 322 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ERP44Q9BS26 406 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 NTMT1Q9BV86 223 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 DPCDQ9BVM2 203 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 RBM4Q9BWF3 364 aaKnown RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 OSBPL10Q9BXB5 764 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ERVK-6Q9BXR3 956 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 GOLPH3Q9H4A6 298 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 RPF2Q9H7B2 306 aaKnown RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 CHODLQ9H9P2 273 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 CBLN4Q9NTU7 201 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 PAQR5Q9NXK6 330 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 TAS2R13Q9NYV9 303 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 CISD1Q9NZ45 108 aaKnown RBP4.79□□□□□ -1.64
PTCD3-207ENST00000467273 PAK5Q9P286 719 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 HEY2Q9UBP5 337 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 ERVK-19Q9WJR5 959 aa4.79□□□□□ -1.64
PTCD3-207ENST00000467273 PRELID1Q9Y255 219 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms