RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 HTR2AP28223 471 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 BCL6P41182 706 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 HES5Q5TA89 166 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 DNM1P46Q6ZS02 220 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 FCRLAQ7L513 359 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 ZDHHC1Q8WTX9 485 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 CNN2Q99439 309 aaKnown RBP18.19■□□□□ 0.5
SDF4-205ENST00000465727 SMAD5Q99717 465 aaKnown RBP18.19■□□□□ 0.5
SDF4-205ENST00000465727 FXYD6Q9H0Q3 95 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 EVA1AQ9H8M9 152 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 NOX4Q9NPH5 578 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.19■□□□□ 0.5
SDF4-205ENST00000465727 ANKRD10Q9NXR5 420 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 PRKAB1Q9Y478 270 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 PCYT1BQ9Y5K3 369 aaPredicted RBP18.19■□□□□ 0.5
SDF4-205ENST00000465727 ETV7Q9Y603 341 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 V9GY05 133 aa18.19■□□□□ 0.5
SDF4-205ENST00000465727 C4orf51C9J302 202 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 EGFP01133 1207 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 EDNRAP25101 427 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 LBX1P52954 281 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 STX4Q12846 297 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 AMZ1Q400G9 498 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 CLVS2Q5SYC1 327 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 PWWP2BQ6NUJ5 590 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 SLC36A1Q7Z2H8 476 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 LRRTM4Q86VH4 590 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 CYB561A3Q8NBI2 242 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 SYNPRQ8TBG9 265 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 SMAP2Q8WU79 429 aaPredicted RBP18.18■□□□□ 0.5
SDF4-205ENST00000465727 SNX33Q8WV41 574 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 GFI1Q99684 422 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 GINS4Q9BRT9 223 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 MCCC2Q9HCC0 563 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 C14orf105Q9NVL8 296 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 HPF1Q9NWY4 346 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 CYB5R1Q9UHQ9 305 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 FBXL4Q9UKA2 621 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 PRAMEF2O60811 474 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 FCER2P06734 321 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 DBIP07108 87 aaKnown RBP18.18■□□□□ 0.5
SDF4-205ENST00000465727 SLC6A6P31641 620 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 DCTDP32321 178 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 H2BFSP57053 126 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 LY6G5CQ5SRR4 150 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 C17orf107Q6ZR85 190 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 NRROSQ86YC3 692 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 RFLNBQ8N5W9 214 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 PXT1Q8NFP0 134 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 OR2A1Q8NGT9 310 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 ATOH1Q92858 354 aaPredicted RBP18.18■□□□□ 0.5
SDF4-205ENST00000465727 MIB2Q96AX9 1013 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 COX14Q96I36 57 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 SLC6A17Q9H1V8 727 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 SLC23A2Q9UGH3 650 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 ICAM5Q9UMF0 924 aa18.18■□□□□ 0.5
SDF4-205ENST00000465727 PPP1R3DO95685 299 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 SLC35G4P0C7Q5 338 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 RPS4Y1P22090 263 aaKnown RBP18.17■□□□□ 0.5
SDF4-205ENST00000465727 ART1P52961 327 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 CBFBQ13951 182 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 PABPC1L2AQ5JQF8 200 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 FCRLBQ6BAA4 426 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 CAMKVQ8NCB2 501 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 OR2AK2Q8NG84 335 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 RPS4Y2Q8TD47 263 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 ARMC5Q96C12 935 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 PRSS16Q9NQE7 514 aa18.17■□□□□ 0.5
SDF4-205ENST00000465727 PCP4L1A6NKN8 68 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 PYCARD-AS1I3L0S3 204 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 GYPBP06028 91 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 UBBP0CG47 229 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 UBCP0CG48 685 aaKnown RBP18.16■□□□□ 0.5
SDF4-205ENST00000465727 LAMP2P13473 410 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 CERS1P27544 350 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 MPGP29372 298 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 RPS27AP62979 156 aaKnown RBP18.16■□□□□ 0.5
SDF4-205ENST00000465727 UBA52P62987 128 aaKnown RBP18.16■□□□□ 0.5
SDF4-205ENST00000465727 LTB4RQ15722 352 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 NDUFAF6Q330K2 333 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 FAM111BQ6SJ93 734 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 ATRAIDQ6UW56 229 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 TMEM17Q86X19 198 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 SLC35F2Q8IXU6 374 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 OR5M1Q8NGP8 315 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 HMGB4Q8WW32 186 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 WDR89Q96FK6 387 aaPredicted RBP18.16■□□□□ 0.5
SDF4-205ENST00000465727 OR1F2PQ96R84 312 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 SDF2Q99470 211 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 PDCD1LG2Q9BQ51 273 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 RSPH9Q9H1X1 276 aaPredicted RBP18.16■□□□□ 0.5
SDF4-205ENST00000465727 TAS2R8Q9NYW2 309 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 SERTAD3Q9UJW9 196 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 GNG8Q9UK08 70 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 TRAV27A0A087WT01 109 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 CHURC1-FNTBB4DL54 471 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 PIN1P1O15428 100 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 ZNF35P13682 527 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 NID1P14543 1247 aa18.16■□□□□ 0.5
SDF4-205ENST00000465727 HOXB1P14653 301 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms