RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 UBQLN4Q9NRR5 601 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 DNAJB12Q9NXW2 375 aaKnown RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 CNOT2Q9NZN8 540 aaKnown RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 SELENONQ9NZV5 590 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 C19orf25Q9UFG5 118 aaPredicted RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 RSL24D1Q9UHA3 163 aaKnown RBP12.57□□□□□ -0.4
HDAC6-215ENST00000465457 SLC7A7Q9UM01 511 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 NPIPA1Q9UND3 350 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 DTX4Q9Y2E6 619 aa12.57□□□□□ -0.4
HDAC6-215ENST00000465457 IGHV1-45A0A0A0MS14 117 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 C2orf92A0A1B0GVN3 265 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 CCDC160A6NGH7 325 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 SERINC4A6NH21 518 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 KIAA1324LA8MWY0 1029 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-215ENST00000465457 SCDO00767 359 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 CHP2O43745 196 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 OR6B1O95007 311 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 IGKV1D-16P01601 117 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 HEXBP07686 556 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 NGFRP08138 427 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 HPGDP15428 266 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 GABRB1P18505 474 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 POU1F1P28069 291 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 RFX3P48380 749 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 LTBQ06643 244 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 EBPQ15125 230 aaKnown RBP12.56□□□□□ -0.4
HDAC6-215ENST00000465457 CNPY1Q3B7I2 92 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF766Q5HY98 468 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 TMEM201Q5SNT2 666 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 SLC25A30Q5SVS4 291 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 FCRLBQ6BAA4 426 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 NDUFAF7Q7L592 441 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 DOLPP1Q86YN1 238 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF614Q8N883 585 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 THAP3Q8WTV1 239 aaPredicted RBP12.56□□□□□ -0.4
HDAC6-215ENST00000465457 APH1BQ8WW43 257 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 TP53INP1Q96A56 240 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 SIGLEC12Q96PQ1 595 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 SLC38A2Q96QD8 506 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 TSC22D3Q99576 134 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 FOXC2Q99958 501 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 RASSF1Q9NS23 344 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 RYDENQ9NUL5 291 aaKnown RBP12.56□□□□□ -0.4
HDAC6-215ENST00000465457 FBXO34Q9NWN3 711 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 PPIEQ9UNP9 301 aaKnown RBP12.56□□□□□ -0.4
HDAC6-215ENST00000465457 COL6A5A8TX70 2615 aa12.56□□□□□ -0.4
HDAC6-215ENST00000465457 STAB1Q9NY15 2570 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 A0A0B4J2E0 115 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CENPVL1A0A0U1RR11 272 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 A0A1B0GX12 115 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CLDN24A6NM45 220 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 FAM90A27PA6NNH2 459 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CLCA1A8K7I4 914 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 PTGES3LE9PB15 166 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 KLF4O43474 513 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 XPNPEP2O43895 674 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CSTAP01040 98 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 PIPP12273 146 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-215ENST00000465457 FMO3P31513 532 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 OMPP47874 163 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 COPZ1P61923 177 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 TFF3Q07654 80 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 RAB39AQ14964 217 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 PCOLCEQ15113 449 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 NEDD8Q15843 81 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 KLHL26Q53HC5 615 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 SLC27A4Q6P1M0 643 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 ULK3Q6PHR2 472 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 ZAR1Q86SH2 424 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 PRIMA1Q86XR5 153 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 SIAH3Q8IW03 269 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CYP4Z2PQ8N1L4 340 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 OR4N2Q8NGD1 307 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 DNAJA4Q8WW22 397 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-215ENST00000465457 TMEM239Q8WW34 195 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 ADIPOR1Q96A54 375 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 MYCBPQ99417 103 aaPredicted RBP12.55□□□□□ -0.4
HDAC6-215ENST00000465457 POLDIP3Q9BY77 421 aaKnown RBP12.55□□□□□ -0.4
HDAC6-215ENST00000465457 RNF32Q9H0A6 362 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 KLHL1Q9NR64 748 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CTPS2Q9NRF8 586 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 FKBP14Q9NWM8 211 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 ANKRD10Q9NXR5 420 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 RPS6KB2Q9UBS0 482 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 PSORS1C1Q9UIG5 152 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 CEPT1Q9Y6K0 416 aa12.55□□□□□ -0.4
HDAC6-215ENST00000465457 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
HDAC6-215ENST00000465457 ZNF407Q9C0G0 2248 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 NPIPA5A0A0B4J1W7 369 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 A0A1W2PQD3 144 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 IRGMA1A4Y4 181 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 OR2W5A6NFC9 320 aa12.54□□□□□ -0.4
HDAC6-215ENST00000465457 SAGE2PA6NJ88 616 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms