RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 COG8Q96MW5 612 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 BCL7BQ9BQE9 202 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 HHATLQ9HCP6 504 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 ERVK-18Q9QC07 812 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 PSORS1C1Q9UIG5 152 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 BSNQ9UPA5 3926 aa15.36■□□□□ 0.05
EXOSC3-203ENST00000465229 ZNF99A8MXY4 864 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 AP3D1O14617 1153 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 GSTM3P21266 225 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 IFNGR2P38484 337 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 IDH2P48735 452 aaKnown RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 MEOX1P50221 254 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 CCR4P51679 360 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 PIGFQ07326 219 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 ST3GAL3Q11203 375 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 DYNC1I2Q13409 638 aaKnown RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 TRAM2Q15035 370 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 SMN1Q16637 294 aaKnown RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 SLX4IPQ5VYV7 408 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 RORBQ92753 470 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 MYDGFQ969H8 173 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 SLC38A4Q969I6 547 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 CCDC90BQ9GZT6 254 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 ZFP64Q9NPA5 681 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 AASSQ9UDR5 926 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 B3GNT3Q9Y2A9 372 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 CLCA1A8K7I4 914 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 CBR3O75828 277 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 OR5F1O95221 314 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 RFPL3SP0C7P2 107 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 HTR2AP28223 471 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 RFC3P40938 356 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 TAS2R41P59536 307 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 SNRPGP62308 76 aaKnown RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 TOMM34Q15785 309 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 PLEKHN1Q494U1 663 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 ENTPD8Q5MY95 495 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 SYT6Q5T7P8 510 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 CCDC103Q8IW40 242 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 ZFP62Q8NB50 900 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 OR4K17Q8NGC6 315 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 OR4K5Q8NGD3 323 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 GPR119Q8TDV5 335 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 BOKQ9UMX3 212 aaPredicted RBP15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 NTNG1Q9Y2I2 539 aa15.35■□□□□ 0.05
EXOSC3-203ENST00000465229 ANKUB1A6NFN9 424 aa15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 MT-ND2P03891 347 aa15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 SLC6A8P48029 635 aa15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 GP2P55259 537 aaKnown RBP15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 SUMO3P55854 103 aaPredicted RBP15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 C12orf73Q69YU5 71 aa15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 FCGR1BQ92637 280 aa15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 MCHR1Q99705 422 aa15.34■□□□□ 0.05
EXOSC3-203ENST00000465229 CDC40O60508 579 aaKnown RBP eCLIP15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 FMO6PO60774 539 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 GLSO94925 669 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 NUDT14O95848 222 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 TP53P04637 393 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 PGCP20142 388 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 CBFBQ13951 182 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 TMEM201Q5SNT2 666 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 SLC6A19Q695T7 634 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 ARSKQ6UWY0 536 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 ZER1Q7Z7L7 766 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 RANBP3LQ86VV4 465 aaPredicted RBP15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 ANKRD13BQ86YJ7 626 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 C1GALT1C1Q96EU7 318 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 Q96MT0 163 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 ZNF559Q9BR84 538 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 COPS4Q9BT78 406 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 TTTY12Q9BZ98 90 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 UBQLN3Q9H347 655 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 PTGES2Q9H7Z7 377 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 ACOT13Q9NPJ3 140 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 CNOT2Q9NZN8 540 aaKnown RBP15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 TESQ9UGI8 421 aaKnown RBP15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 LHX6Q9UPM6 363 aa15.33■□□□□ 0.04
EXOSC3-203ENST00000465229 A0A087WUU8 490 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 ERVH48-1M5A8F1 160 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 INMTO95050 263 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 CDK1P06493 297 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 MST1P26927 711 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 GSSP48637 474 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 QPRTQ15274 297 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 OR1Q1Q15612 314 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 TBCEQ15813 527 aaPredicted RBP15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 HYAL4Q2M3T9 481 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 RNFT1Q5M7Z0 435 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 UBE2UQ5VVX9 321 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 PCSK4Q6UW60 755 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 PTCHD4Q6ZW05 846 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 AHSA2Q719I0 299 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 LSMEM1Q8N8F7 131 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 GNPDA2Q8TDQ7 276 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 ACOT11Q8WXI4 607 aaPredicted RBP15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 GGHQ92820 318 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 TRIM2Q9C040 744 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 CTPS2Q9NRF8 586 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 MED17Q9NVC6 651 aa15.32■□□□□ 0.04
EXOSC3-203ENST00000465229 CLN6Q9NWW5 311 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms