RNA–Protein interactions for RNA: ENST00000464870.5

PTPN7-205, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 4

Gene PTPN7, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-205	ENST00000464870	CCL21	O00585	134 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	AQP7	O14520	342 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	MITF	O75030	526 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	TPO	P07202	933 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	PEPD	P12955	493 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	IFI30	P13284	250 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	GCK	P35557	465 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	APOBEC1	P41238	236 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	CA7	P43166	264 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	HTR3A	P46098	478 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	EGR4	Q05215	589 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	CRYZ	Q08257	329 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	DAG1	Q14118	895 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	C3AR1	Q16581	482 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	TMEM44	Q2T9K0	475 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	SWT1	Q5T5J6	900 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	PGBD2	Q6P3X8	592 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	MTFR2	Q6P444	385 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	CLEC18B	Q6UXF7	455 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	RRM2B	Q7LG56	351 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	FJX1	Q86VR8	437 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	CHERP	Q8IWX8	916 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	ATG16L2	Q8NAA4	619 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	CLEC18C	Q8NCF0	446 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	FAM57A	Q8TBR7	257 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	SSC4D	Q8WTU2	575 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	GTPBP3	Q969Y2	492 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZBTB8A	Q96BR9	441 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	SARAF	Q96BY9	339 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	SDCCAG3	Q96C92	435 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	KTI12	Q96EK9	354 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	FAM46A	Q96IP4	442 aa	Known RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	HS6ST2	Q96MM7	605 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	NIPSNAP1	Q9BPW8	284 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZNF426	Q9BUY5	554 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	KLHL4	Q9C0H6	718 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	OR2B2	Q9GZK3	357 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	GABARAPL1	Q9H0R8	117 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC6A15	Q9H2J7	730 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	C12orf10	Q9HB07	376 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	C20orf141	Q9NUB4	165 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	SLC6A5	Q9Y345	797 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	MED31	Q9Y3C7	131 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	LIPG	Q9Y5X9	500 aa		11.1	□□□□□ -0.63
PTPN7-205	ENST00000464870	BCKDK	O14874	412 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZNHIT1	O43257	154 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	HPN	P05981	417 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZNF26	P17031	533 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	FUT1	P19526	365 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	MAK	P20794	623 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	CBL	P22681	906 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	SHC1	P29353	583 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	EIF1	P41567	113 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	RBM34	P42696	430 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	GPR4	P46093	362 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	OMP	P47874	163 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	STAR	P49675	285 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	IL1RL1	Q01638	556 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	PRKCD	Q05655	676 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	LTB	Q06643	244 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	GK3P	Q14409	553 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	WLS	Q5T9L3	541 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	PPP4R4	Q6NUP7	873 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	FAHD1	Q6P587	224 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	FGD2	Q7Z6J4	655 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	GALNT5	Q7Z7M9	940 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	CD163	Q86VB7	1156 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	NEIL3	Q8TAT5	605 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	PIGX	Q8TBF5	258 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	SMPDL3B	Q92485	455 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	SFXN2	Q96NB2	322 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	TACO1	Q9BSH4	297 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	OSBPL10	Q9BXB5	764 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	CHRNA9	Q9UGM1	479 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	TINAG	Q9UJW2	476 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	PRDM4	Q9UKN5	801 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	MRPS18C	Q9Y3D5	142 aa	Known RBP	11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	ZNF337	Q9Y3M9	751 aa		11.09	□□□□□ -0.63
PTPN7-205	ENST00000464870	C7orf72	A4D263	438 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	ENO4	A6NNW6	628 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870		H3BML4	177 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	CH25H	O95992	272 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	IGFBP1	P08833	259 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	TFPI	P10646	304 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	ADH6	P28332	368 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	SFTPD	P35247	375 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	VHL	P40337	213 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	RPS5	P46782	204 aa	Known RBP	11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	PPP2R2B	Q00005	443 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	ZIK1	Q3SY52	487 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	GLYR1	Q49A26	553 aa	Predicted RBP	11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	GXYLT1	Q4G148	440 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	C1orf94	Q6P1W5	598 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	DOLPP1	Q86YN1	238 aa		11.08	□□□□□ -0.64
PTPN7-205	ENST00000464870	RNF113B	Q8IZP6	322 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms