RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ARFGAP2Q8N6H7 521 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 EIF1ADQ8N9N8 165 aaKnown RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 POMGNT2Q8NAT1 580 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 FNDC5Q8NAU1 212 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 HPS1Q92902 700 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 OR51I1Q9H343 314 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 PLK3Q9H4B4 646 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 EXOSC3Q9NQT5 275 aaKnown RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 FBXO9Q9UK97 447 aaPredicted RBP12.72□□□□□ -0.37
MCF2L-220ENST00000464800 DYSFO75923 2080 aa12.72□□□□□ -0.37
MCF2L-220ENST00000464800 TMED7-TICAM2A0A0A6YYA0 188 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 TLDC2A0PJX2 215 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 ZNF208O43345 1280 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.37
MCF2L-220ENST00000464800 STAMBPO95630 424 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 AGR2O95994 175 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 ERCC1P07992 297 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-220ENST00000464800 GUSBP08236 651 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 DAOP14920 347 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 GIFP27352 417 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 APEX1P27695 318 aaKnown RBP12.71□□□□□ -0.37
MCF2L-220ENST00000464800 IL2RGP31785 369 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 IDH2P48735 452 aaKnown RBP12.71□□□□□ -0.37
MCF2L-220ENST00000464800 IDH3GP51553 393 aaPredicted RBP12.71□□□□□ -0.37
MCF2L-220ENST00000464800 POLR2HP52434 150 aaKnown RBP12.71□□□□□ -0.37
MCF2L-220ENST00000464800 ZSWIM7Q19AV6 140 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 PGS1Q32NB8 556 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 C6orf136Q5SQH8 315 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 VHLLQ6RSH7 139 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 PAQR6Q6TCH4 344 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 AAED1Q7RTV5 226 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 CLECL1Q8IZS7 167 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 LINC01356Q8N9X3 169 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 MIPOL1Q8TD10 442 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 PMM1Q92871 262 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 BOD1Q96IK1 185 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 C3orf30Q96M34 536 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 MECRQ9BV79 373 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 ADAM19Q9H013 955 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 TMED7Q9Y3B3 224 aa12.71□□□□□ -0.37
MCF2L-220ENST00000464800 TMEM72A0PK05 275 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 KRT33AO76009 404 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 TACSTD2P09758 323 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 IMPDH2P12268 514 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 PAX7P23759 505 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 SLC1A3P43003 542 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 UBE2NP61088 152 aaKnown RBP12.7□□□□□ -0.38
MCF2L-220ENST00000464800 KCNJ10P78508 379 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 HPCAP84074 193 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 TBRG1Q3YBR2 411 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 OTUD3Q5T2D3 398 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-220ENST00000464800 FRRS1Q6ZNA5 592 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 ZCCHC23Q6ZST2 131 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 HMGN2P46Q86SG4 172 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 OR4A15Q8NGL6 344 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 OR1K1Q8NGR3 316 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 XAGE5Q8WWM1 108 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 ROPN1LQ96C74 230 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 APOPT1Q96IL0 206 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 SNX18Q96RF0 628 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.7□□□□□ -0.38
MCF2L-220ENST00000464800 TMEM45AQ9NWC5 275 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 MKS1Q9NXB0 559 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 SLC17A7Q9P2U7 560 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 OSGIN1Q9UJX0 560 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 PCDHB14Q9Y5E9 798 aa12.7□□□□□ -0.38
MCF2L-220ENST00000464800 ZNF587BE7ETH6 402 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 AP3D1O14617 1153 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 LILRA1O75019 489 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 SKAP2O75563 359 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-220ENST00000464800 OR12D1P0DN82 309 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 PCMT1P22061 227 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 KHKP50053 298 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 MAP2K6P52564 334 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 CDH15P55291 814 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 NAAAQ02083 359 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 PLAURQ03405 335 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 FUT5Q11128 374 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 OR4F3Q6IEY1 312 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 TNFAIP8L2Q6P589 184 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-220ENST00000464800 UGT2A3Q6UWM9 527 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 OR4F15Q8NGB8 312 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 OR9K2Q8NGE7 335 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 NEU4Q8WWR8 484 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-220ENST00000464800 RAB8BQ92930 207 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 AURKBQ96GD4 344 aaPredicted RBP12.69□□□□□ -0.38
MCF2L-220ENST00000464800 ZNF385AQ96PM9 386 aaKnown RBP12.69□□□□□ -0.38
MCF2L-220ENST00000464800 SF3B5Q9BWJ5 86 aaKnown RBP12.69□□□□□ -0.38
MCF2L-220ENST00000464800 SAP130Q9H0E3 1048 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 OCEL1Q9H607 264 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 METRNQ9UJH8 293 aa12.69□□□□□ -0.38
MCF2L-220ENST00000464800 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
MCF2L-220ENST00000464800 ARPC4-TTLL3A0A0A6YYG9 625 aa12.68□□□□□ -0.38
MCF2L-220ENST00000464800 A0A0A6YYJ9 748 aa12.68□□□□□ -0.38
MCF2L-220ENST00000464800 ZC3H12DA2A288 527 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms