RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 CDH9Q9ULB4 789 aa3.42□□□□□ -1.86
USP25-207ENST00000464435 CLEC4EQ9ULY5 219 aa3.42□□□□□ -1.86
USP25-207ENST00000464435 UBQLN1Q9UMX0 589 aaKnown RBP3.42□□□□□ -1.86
USP25-207ENST00000464435 STK38LQ9Y2H1 464 aa3.42□□□□□ -1.86
USP25-207ENST00000464435 TUBAL3A6NHL2 446 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 FCMRO60667 390 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.86
USP25-207ENST00000464435 POLR2EP19388 210 aaKnown RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 HOXD10P28358 340 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 NMT1P30419 496 aaKnown RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 FGF9P31371 208 aaPredicted RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 RDXP35241 583 aaKnown RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 KIR2DS2P43631 304 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 HLCSP50747 726 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 CARD18P57730 90 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 BST1Q10588 318 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 MESDQ14696 234 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 FBXO48Q5FWF7 155 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 ZNF658Q5TYW1 1059 aaPredicted RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 Q6ZPB1 254 aaPredicted RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 TRPM8Q7Z2W7 1104 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 SLC35F2Q8IXU6 374 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 FBXL16Q8N461 479 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 C11orf42Q8N5U0 333 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 OR10H4Q8NGA5 316 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 OR8K3Q8NH51 312 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 OR56B4Q8NH76 319 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 ZPLD1Q8TCW7 415 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 IFT74Q96LB3 600 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 RPRD1AQ96P16 312 aaPredicted RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 KLHDC3Q9BQ90 382 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 C11orf70Q9BRQ4 267 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 NIPSNAP3BQ9BS92 247 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 NAT10Q9H0A0 1025 aaKnown RBP3.41□□□□□ -1.86
USP25-207ENST00000464435 SLITRK2Q9H156 845 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 POPDC2Q9HBU9 364 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 SGK2Q9HBY8 427 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 ONECUT1Q9UBC0 465 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 ERVW-1Q9UQF0 538 aa3.41□□□□□ -1.86
USP25-207ENST00000464435 IGHV1OR15-1A0A075B7D0 117 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 TRAV26-1A0A087WT03 109 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 K7N7A8 449 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 RGS16O15492 202 aaPredicted RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 ZNF264O43296 627 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 RNF13O43567 381 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 CXCL13O43927 109 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 HCN1O60741 890 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 UGT2B17O75795 530 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 SCGNO76038 276 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 DIRAS1O95057 198 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 NDUFB10O96000 172 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 IGHG4P01861 327 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 CAPN1P07384 714 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 CCDC172P0C7W6 258 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 KLK2P20151 261 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 IMPDH1P20839 514 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 HMGB2P26583 209 aaKnown RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 AQP1P29972 269 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 DAP3P51398 398 aaKnown RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 EFNB2P52799 333 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 EIF3EP60228 445 aaKnown RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 IGLV3-21P80748 117 aaPredicted RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 NOTCH2Q04721 2471 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 EGFEM1PQ0D2K5 195 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 KIAA0040Q15053 153 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 SYCP1Q15431 976 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 RNF212Q495C1 297 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 SPANXN2Q5MJ10 180 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 C9orf129Q5T035 196 aaKnown RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 PDZK1Q5T2W1 519 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 BEND3Q5T5X7 828 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 GPRC6AQ5T6X5 926 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 METTL11BQ5VVY1 283 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 ATL3Q6DD88 541 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 KDM7AQ6ZMT4 941 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 BZW1Q7L1Q6 419 aaKnown RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 NLRP9Q7RTR0 991 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 BIVMQ86UB2 503 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 CDR2LQ86X02 465 aaPredicted RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 ECHDC2Q86YB7 292 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 ZBED8Q8IZ13 594 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 LRRC75A-AS1Q8N1F1 130 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 MFSD9Q8NBP5 474 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 BPIFCQ8NFQ6 507 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 FAM81AQ8TBF8 368 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 MCUR1Q96AQ8 359 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 MTMR9Q96QG7 549 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 NPY6RQ99463 290 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 CHP1Q99653 195 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 ZNF184Q99676 751 aaPredicted RBP3.4□□□□□ -1.87
USP25-207ENST00000464435 ZNF670Q9BS34 389 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 ZNF385DQ9H6B1 395 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 NEK6Q9HC98 313 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 NANSQ9NR45 359 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 TMEM9Q9P0T7 183 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 PLLPQ9Y342 182 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 IFT52Q9Y366 437 aa3.4□□□□□ -1.87
USP25-207ENST00000464435 ADAMTS9Q9P2N4 1935 aa3.39□□□□□ -1.87
USP25-207ENST00000464435 IGLV3-10A0A075B6K4 115 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms