RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 XRCC1P18887 633 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 HMGB2P26583 209 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 RPL9P32969 192 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 ETV5P41161 510 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 SLC1A4P43007 532 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 CRATP43155 626 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 BDKRB1P46663 353 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 DUSP3P51452 185 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 NOVA1P51513 510 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 DNA2P51530 1060 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 EFNB2P52799 333 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 OSTNP61366 133 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 DHODHQ02127 395 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 HSDL1Q3SXM5 330 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 TP53I3Q53FA7 332 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 LY6G6FQ5SQ64 297 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 BEND6Q5SZJ8 279 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 PTRHD1Q6GMV3 140 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 TCEAL6Q6IPX3 200 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 PNCKQ6P2M8 343 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 SASS6Q6UVJ0 657 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 Q6ZRG5 221 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 RFPL4BQ6ZWI9 263 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 CYS1Q717R9 158 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 NIPA1Q7RTP0 329 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 MRPL21Q7Z2W9 205 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 GPR142Q7Z601 462 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 ANKRD37Q7Z713 158 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 C17orf64Q86WR6 236 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 TMEM17Q86X19 198 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 MMAAQ8IVH4 418 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 CMTM8Q8IZV2 173 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 FAM89BQ8N5H3 189 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 SUMF1Q8NBK3 374 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 OR4D6Q8NGJ1 314 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 CNIH3Q8TBE1 160 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 KIFAP3Q92845 792 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 TNFRSF14Q92956 283 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 TSSK3Q96PN8 268 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 MBOAT4Q96T53 435 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 SLC6A7Q99884 636 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 P2RY13Q9BPV8 354 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 APOOQ9BUR5 198 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 CHID1Q9BWS9 393 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 GPR174Q9BXC1 333 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 SLC25A51Q9H1U9 297 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 OPN3Q9H1Y3 402 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 ANKRD19PQ9H560 264 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 UCK1Q9HA47 277 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 CSNK1G1Q9HCP0 422 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 LYARQ9NX58 379 aaKnown RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 MS4A12Q9NXJ0 267 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 ADA2Q9NZK5 511 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 ADAM22Q9P0K1 906 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 MBD2Q9UBB5 411 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 HMGXB4Q9UGU5 601 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 ZNF107Q9UII5 783 aaPredicted RBP3.2□□□□□ -1.9
ITGB1-208ENST00000464001 FBXL4Q9UKA2 621 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 IKZF2Q9UKS7 526 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 FLVCR2Q9UPI3 526 aa3.2□□□□□ -1.9
ITGB1-208ENST00000464001 AFF2P51816 1311 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 GSTTP1A0A1W2PQM5 241 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 LRRIQ3A6PVS8 624 aaPredicted RBP3.19□□□□□ -1.9
ITGB1-208ENST00000464001 A8MXQ7 604 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ANHXE9PGG2 379 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 HDAC3O15379 428 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 GPAA1O43292 621 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 SNAP91O60641 907 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 SCN2BO60939 215 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 N4BP1O75113 896 aaKnown RBP3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ANXA9O76027 345 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 TOXO94900 526 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 DIRAS1O95057 198 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 BRI3O95415 125 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 CLDN9O95484 217 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 F10P00742 488 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 SERPIND1P05546 499 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 FCER2P06734 321 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 GSTA1P08263 222 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 HSMCR30P0CW71 290 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 MBL2P11226 248 aaPredicted RBP3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ZNF24P17028 368 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 TCN1P20061 433 aaPredicted RBP3.19□□□□□ -1.9
ITGB1-208ENST00000464001 PGCP20142 388 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 IL32P24001 234 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 IL12BP29460 328 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 CD40LGP29965 261 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 RGRP47804 291 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 OR3A2P47893 321 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 HMGCS2P54868 508 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 BACE1P56817 501 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 OR1D5P58170 312 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ERVK-25P63136 954 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 STX3Q13277 289 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ITGB3BPQ13352 177 aaPredicted RBP3.19□□□□□ -1.9
ITGB1-208ENST00000464001 PMS2P3Q13401 168 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ART3Q13508 389 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 VGLL4Q14135 290 aa3.19□□□□□ -1.9
ITGB1-208ENST00000464001 ATXN7L3Q14CW9 347 aaPredicted RBP3.19□□□□□ -1.9
ITGB1-208ENST00000464001 PPP1R3AQ16821 1122 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms