RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 GALNT12Q8IXK2 581 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CDK20Q8IZL9 346 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 VWA5B2Q8N398 1253 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 ARIH2OSQ8N7S6 290 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 LSMEM1Q8N8F7 131 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 FANK1Q8TC84 345 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GPR151Q8TDV0 419 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 MVB12AQ96EY5 273 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SAMD8Q96LT4 415 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SRRQ9GZT4 340 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 HINT3Q9NQE9 182 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 POLE4Q9NR33 117 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SLC22A11Q9NSA0 550 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 RALYQ9UKM9 306 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 MED31Q9Y3C7 131 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GRIP1Q9Y3R0 1128 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 A0A0B4J2E0 115 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 A0A1B0GX12 115 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CT62P0C5K7 136 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 PRKAR1AP10644 381 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 RNH1P13489 461 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 PRG2P13727 222 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 S1PR1P21453 382 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GALNSP34059 522 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 RNF144AP50876 292 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 PSMD4P55036 377 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 RPS25P62851 125 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CBX3Q13185 183 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 BIKQ13323 160 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 FAM53BQ14153 422 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SSPNQ14714 243 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF141Q15928 474 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 C22orf42Q6IC83 251 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 NIPAL3Q6P499 406 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 XKRXQ6PP77 449 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 METAP1DQ6UB28 335 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CCBE1Q6UXH8 406 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 WDR88Q6ZMY6 472 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 MEPCEQ7L2J0 689 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GDPD3Q7L5L3 318 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 OVCH1Q7RTY7 1134 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 MEX3DQ86XN8 651 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GDPD1Q8N9F7 314 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SLC2A12Q8TD20 617 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 GATAD2BQ8WXI9 593 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 THAP4Q8WY91 577 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 EXTL1Q92935 676 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 NACC2Q96BF6 587 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 BBC3Q96PG8 261 aaPredicted RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 KATNB1Q9BVA0 655 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 TRIM2Q9C040 744 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SLC26A1Q9H2B4 701 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 TMEM27Q9HBJ8 222 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 CMC2Q9NRP2 79 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 HAO2Q9NYQ3 351 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 TNFRSF10DQ9UBN6 386 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 SIGLEC7Q9Y286 467 aa9.07□□□□□ -0.96
PTPRD-207ENST00000463477 MRPS33Q9Y291 106 aaKnown RBP9.07□□□□□ -0.96
PTPRD-207ENST00000463477 HTR3EA5X5Y0 456 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 SLC22A31A6NKX4 558 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 NPIPB9F8W1W9 429 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 PEX12O00623 359 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 SNPHO15079 494 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 HCN1O60741 890 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 CTNSO60931 367 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 PTP4A3O75365 173 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 NTN1O95631 604 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 IFI30P13284 250 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 MAKP20794 623 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 GABRA3P34903 492 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 RPS18P62269 152 aaKnown RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 PPP3R1P63098 170 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 PSG6Q00889 435 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 FABP5Q01469 135 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ID2Q02363 134 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 PLAURQ03405 335 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 RIN1Q13671 783 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 TRAM1Q15629 374 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ZNHIT3Q15649 155 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF79Q15937 498 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 DDI2Q5TDH0 399 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 NUP210LQ5VU65 1888 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 SMARCD3Q6STE5 483 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ZNF322Q6U7Q0 402 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 LINC00114Q6XXX2 140 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 CPOQ8IVL8 374 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ACBD7Q8N6N7 88 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 OR4F15Q8NGB8 312 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 ADAMTS17Q8TE56 1095 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 DNAJA4Q8WW22 397 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 SLC39A7Q92504 469 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 EFHD2Q96C19 240 aaPredicted RBP9.06□□□□□ -0.96
PTPRD-207ENST00000463477 BPIFA2Q96DR5 249 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 C1GALT1C1Q96EU7 318 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 MIXL1Q9H2W2 232 aa9.06□□□□□ -0.96
PTPRD-207ENST00000463477 FOLH1BQ9HBA9 442 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms