RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 FCGR1AP12314 374 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 GABRA1P14867 456 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 IL7RP16871 459 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 BMP7P18075 431 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 SLC6A2P23975 617 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 CD40LGP29965 261 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 IFNA8P32881 189 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 EIF1P41567 113 aaKnown RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 NR4A2P43354 598 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 B3GALT5-AS1P59052 145 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 GABARAPL2P60520 117 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 KCNJ10P78508 379 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 ADARB1P78563 741 aaKnown RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 CBFBQ13951 182 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 LARS2Q15031 903 aaKnown RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 TMEM44Q2T9K0 475 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 PLPPR5Q32ZL2 321 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 RBM48Q5RL73 367 aaKnown RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 SLC16A12Q6ZSM3 486 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 KRT73Q86Y46 540 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 C10orf111Q8N326 155 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 CLIP4Q8N3C7 705 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 GTPBP8Q8N3Z3 284 aaPredicted RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 LSMEM1Q8N8F7 131 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 NFKBIDQ8NI38 313 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 PHF10Q8WUB8 498 aaKnown RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 MAL2Q969L2 176 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 CENPNQ96H22 339 aaPredicted RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 QRSL1Q9H0R6 528 aaKnown RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 SPAG4Q9NPE6 437 aa10.02□□□□□ -0.8
APTX-209ENST00000460940 SMPD3Q9NY59 655 aaPredicted RBP10.02□□□□□ -0.8
APTX-209ENST00000460940 NCKAP5O14513 1909 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 RELNP78509 3460 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 E9PLN8 166 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 LRRTM2O43300 516 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 OIP5O43482 229 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 CPN1P15169 458 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 ELK4P28324 431 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 POLR2IP36954 125 aaKnown RBP10.02□□□□□ -0.81
APTX-209ENST00000460940 SLC6A8P48029 635 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 AQP6Q13520 282 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 SCARB2Q14108 478 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 GXYLT1Q4G148 440 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 CYBRD1Q53TN4 286 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 EMC4Q5J8M3 183 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 RPS26P11Q5JNZ5 115 aaPredicted RBP10.02□□□□□ -0.81
APTX-209ENST00000460940 C8orf82Q6P1X6 216 aaPredicted RBP10.02□□□□□ -0.81
APTX-209ENST00000460940 CBLN3Q6UW01 205 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 ARSKQ6UWY0 536 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 SLC51BQ86UW2 128 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 DHFR2Q86XF0 187 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 ZNF440Q8IYI8 595 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 FAM156AQ8NDB6 213 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 OR6Q1Q8NGQ2 317 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 OR52P1PQ8NH57 321 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 GRPEL2Q8TAA5 225 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 CYGBQ8WWM9 190 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 ZG16BQ96DA0 208 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 TIMP4Q99727 224 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 VKORC1Q9BQB6 163 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 SPATA5L1Q9BVQ7 753 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 ZNF229Q9UJW7 825 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 VDAC3Q9Y277 283 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 ZNF443Q9Y2A4 671 aaPredicted RBP10.02□□□□□ -0.81
APTX-209ENST00000460940 RPH3AQ9Y2J0 694 aaPredicted RBP10.02□□□□□ -0.81
APTX-209ENST00000460940 MEMO1Q9Y316 297 aa10.02□□□□□ -0.81
APTX-209ENST00000460940 OR2M5A3KFT3 312 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 AHRRA9YTQ3 701 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 ETV2O00321 342 aaPredicted RBP10.01□□□□□ -0.81
APTX-209ENST00000460940 CCL21O00585 134 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 GMFGO60234 142 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 AGFG2O95081 481 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 NUDT14O95848 222 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 PTTG1O95997 202 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 BMP4P12644 408 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 PEPDP12955 493 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 TCN1P20061 433 aaPredicted RBP10.01□□□□□ -0.81
APTX-209ENST00000460940 PGCP20142 388 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 POU3F2P20265 443 aaPredicted RBP10.01□□□□□ -0.81
APTX-209ENST00000460940 FASP25445 335 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 ACVR2AP27037 513 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 ADH6P28332 368 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 PCGF2P35227 344 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 RNF144AP50876 292 aaPredicted RBP10.01□□□□□ -0.81
APTX-209ENST00000460940 CCR4P51679 360 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 PPP5CP53041 499 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 COPZ1P61923 177 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 DGUOKQ16854 277 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 ZNF181Q2M3W8 571 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 NDUFAF6Q330K2 333 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 CDONQ4KMG0 1287 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 C4orf46Q504U0 113 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 ERICH5Q6P6B1 374 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 CCBE1Q6UXH8 406 aaPredicted RBP10.01□□□□□ -0.81
APTX-209ENST00000460940 RPTNQ6XPR3 784 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 ZBTB46Q86UZ6 589 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 PTOV1Q86YD1 416 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 OR5M9Q8NGP3 310 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 OR10A6Q8NH74 314 aa10.01□□□□□ -0.81
APTX-209ENST00000460940 GPR119Q8TDV5 335 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms