RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 RNF2Q99496 336 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 YTHDF1Q9BYJ9 559 aaKnown RBP3.95□□□□□ -1.78
CCDC50-203ENST00000460064 RBKSQ9H477 322 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 YY1AP1Q9H869 796 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 FOLH1BQ9HBA9 442 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 SGK2Q9HBY8 427 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 MARCH5Q9NX47 278 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 TREM2Q9NZC2 230 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 BFARQ9NZS9 450 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 ABCG2Q9UNQ0 655 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 PIGLQ9Y2B2 252 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 IFT52Q9Y366 437 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 LRRK1Q38SD2 2015 aa3.95□□□□□ -1.78
CCDC50-203ENST00000460064 IQANK1A0A1B0GTG1 560 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 FAM240BA0A1B0GVZ2 78 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 TCRBV9S1A1TA0A576 114 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 HELTA6NFD8 242 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 A8MXQ7 604 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 GOLGA8SH3BPF8 625 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 RAMP3O60896 148 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 PALMO75781 387 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 SNAPINO95295 136 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 STAMBPO95630 424 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 IGHV3-48P01763 117 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 CD1EP15812 388 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 ATP6V1B2P21281 511 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 RFC4P35249 363 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 CSNK1G2P78368 415 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 DMTNQ08495 405 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 DDX39BQ13838 428 aaKnown RBP3.94□□□□□ -1.78
CCDC50-203ENST00000460064 GRB7Q14451 532 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 OXA1LQ15070 435 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 IMMTQ16891 758 aaKnown RBP3.94□□□□□ -1.78
CCDC50-203ENST00000460064 KLHL38Q2WGJ6 581 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 RNF212Q495C1 297 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 FILIP1LQ4L180 1135 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 OR2A2Q6IF42 318 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 ZNF544Q6NX49 715 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 BBS1Q8NFJ9 593 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 OR4K14Q8NGD5 310 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 OR52I1Q8NGK6 324 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 FBXO32Q969P5 355 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 NPY6RQ99463 290 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 EBF4Q9BQW3 602 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 SUDS3Q9H7L9 328 aaPredicted RBP3.94□□□□□ -1.78
CCDC50-203ENST00000460064 PLSCR3Q9NRY6 295 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 PRR34Q9NV39 138 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 THUMPD1Q9NXG2 353 aaKnown RBP3.94□□□□□ -1.78
CCDC50-203ENST00000460064 IL17CQ9P0M4 197 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 SEC14L3Q9UDX4 400 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 BTNL2Q9UIR0 455 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 TP53TG3Q9ULZ0 132 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 STAP1Q9ULZ2 295 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 TMCO1Q9UM00 188 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 UGT2A1Q9Y4X1 527 aa3.94□□□□□ -1.78
CCDC50-203ENST00000460064 CHD4Q14839 1912 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 FOXE1O00358 373 aaPredicted RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 OXSR1O95747 527 aaPredicted RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 TSPAN12O95859 305 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 LGI1O95970 557 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 TIMP1P01033 207 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 GABRR1P24046 479 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 QARSP47897 775 aaKnown RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 SEC61GP60059 68 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 OGDHQ02218 1023 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 ASPHQ12797 758 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 DUSP7Q16829 419 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 SAMD4BQ5PRF9 694 aaKnown RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 PHYHD1Q5SRE7 291 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 TRIM69Q86WT6 500 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 ECHDC2Q86YB7 292 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 PRR22Q8IZ63 422 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 OR1L4Q8NGR5 311 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 ZNF564Q8TBZ8 553 aaPredicted RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 OR1E3Q8WZA6 343 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 PAGE5Q96GU1 130 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 MTMR9Q96QG7 549 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 POLR2J2Q9GZM3 115 aaKnown RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 POLR2J3Q9H1A7 115 aaKnown RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 TRAF3IP3Q9Y228 551 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 RPL36Q9Y3U8 105 aaKnown RBP3.93□□□□□ -1.78
CCDC50-203ENST00000460064 V9GY05 133 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 SH3TC1Q8TE82 1336 aa3.93□□□□□ -1.78
CCDC50-203ENST00000460064 PIK3R4Q99570 1358 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 AGRNO00468 2067 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 IGKV1D-8A0A087WSZ0 117 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 BTBD17A6NE02 478 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 MBTPS2O43462 519 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 CLDN9O95484 217 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 NCF2P19878 526 aaPredicted RBP3.92□□□□□ -1.78
CCDC50-203ENST00000460064 MX1P20591 662 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 UGT1A5P35504 534 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 DDOSTP39656 456 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 GPM6AP51674 278 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 NDPQ00604 133 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 PLD1Q13393 1074 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 VGLL4Q14135 290 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 KLF17Q5JT82 389 aaPredicted RBP3.92□□□□□ -1.78
CCDC50-203ENST00000460064 EOGTQ5NDL2 527 aa3.92□□□□□ -1.78
CCDC50-203ENST00000460064 GPRC6AQ5T6X5 926 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms