RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 MARCH7Q9H992 704 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 PLEKHA1Q9HB21 404 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 ACOXLQ9NUZ1 547 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 MCUBQ9NWR8 336 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 UCKL1Q9NWZ5 548 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 PLCL2Q9UPR0 1127 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 YBX2Q9Y2T7 364 aaKnown RBP8.13□□□□□ -1.11
HDAC3-202ENST00000459727 MMACHCQ9Y4U1 282 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 PIAS3Q9Y6X2 628 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 HEATR5BQ9P2D3 2071 aa8.13□□□□□ -1.11
HDAC3-202ENST00000459727 CDH23Q9H251 3354 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SMIM30A4D0T7 59 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 GRXCR1A8MXD5 290 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 H0Y8X5 98 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 AIPO00170 330 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SCDO00767 359 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 OR2B3O76000 313 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 TXNDC12O95881 172 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 RAF1P04049 648 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 EIF4EP06730 217 aaKnown RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 MRPL3P09001 348 aaKnown RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 CT62P0C5K7 136 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 CALCBP10092 127 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 UBL4AP11441 157 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HIST1H1CP16403 213 aaKnown RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 FUT1P19526 365 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 S1PR1P21453 382 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 EDNRAP25101 427 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 GPR3P46089 330 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 FASLGP48023 281 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 EPHA4P54764 986 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 OR12D2P58182 307 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ELOCQ15369 112 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 CCDC85BQ15834 202 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ELFN2Q5R3F8 820 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF362Q5T0B9 420 aaPredicted RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 BTN2A1Q7KYR7 527 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SLC16A9Q7RTY1 509 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HDDC2Q7Z4H3 204 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 CADM2Q8N3J6 435 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ARHGEF39Q8N4T4 335 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 FAM71CQ8NEG0 241 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 OR13H1Q8NG92 308 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 NSMAFQ92636 917 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 MVB12AQ96EY5 273 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 PELI1Q96FA3 418 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HSPA12BQ96MM6 686 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF285Q96NJ3 590 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SLC46A1Q96NT5 459 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 FYTTD1Q96QD9 318 aaKnown RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HCAR1Q9BXC0 346 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 PBX4Q9BYU1 374 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 NMNAT2Q9BZQ4 307 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 PCED1AQ9H1Q7 454 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SLC6A17Q9H1V8 727 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 BRD7Q9NPI1 651 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 SLC2A4RGQ9NR83 387 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 UBQLN4Q9NRR5 601 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 RXFP3Q9NSD7 469 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 EVA1BQ9NVM1 165 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 NCDNQ9UBB6 729 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 GMEB2Q9UKD1 530 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 HIF3AQ9Y2N7 669 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF281Q9Y2X9 895 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 MRPS2Q9Y399 296 aaKnown RBP8.12□□□□□ -1.11
HDAC3-202ENST00000459727 CLCA3PQ9Y6N3 262 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 NUMA1Q14980 2115 aa8.12□□□□□ -1.11
HDAC3-202ENST00000459727 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 TRBV23OR9-2A0A075B6M9 112 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 NPIPA5A0A0B4J1W7 369 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 A8MU76 341 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-202ENST00000459727 NPIPA7E9PJI5 369 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 GABARAPH6UMI1 98 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 SCAMP1O15126 338 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 EEF1E1O43324 174 aaKnown RBP8.11□□□□□ -1.11
HDAC3-202ENST00000459727 ZNF780AO75290 641 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-202ENST00000459727 NTN1O95631 604 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 RENP00797 406 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 TCRBP04435 133 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 CD14P08571 375 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 NPIPA8P0DM63 369 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 PVRP15151 417 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 SPI1P17947 270 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 GABRG2P18507 467 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 SDHAP31040 664 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 HOXD11P31277 338 aaPredicted RBP8.11□□□□□ -1.11
HDAC3-202ENST00000459727 FAUP35544 74 aaKnown RBP8.11□□□□□ -1.11
HDAC3-202ENST00000459727 CAPZBP47756 277 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 LSSP48449 732 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 E2F1Q01094 437 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 EGR3Q06889 387 aa8.11□□□□□ -1.11
HDAC3-202ENST00000459727 RASGEF1BQ0VAM2 473 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms