RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FAM98AQ8NCA5 519 aaKnown RBP16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 DUSP18Q8NEJ0 188 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 DDOQ99489 341 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 CYSLTR2Q9NS75 346 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 PLCL2Q9UPR0 1127 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 TMEM184BQ9Y519 407 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 IER3IP1Q9Y5U9 82 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 CACNA1IQ9P0X4 2223 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 ZNF780AO75290 641 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 LYPD8Q6UX82 237 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 LIX1LQ8IVB5 337 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 RFLNBQ8N5W9 214 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 SDR9C7Q8NEX9 313 aa16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 ZMYND19Q96E35 227 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 MMABQ96EY8 250 aaPredicted RBP16.85■□□□□ 0.29
SEMA3B-209ENST00000456560 A0A0G2JMP0 313 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 LILRA5A6NI73 299 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 CHURC1-FNTBB4DL54 471 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 OGG1O15527 345 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 PPM1BO75688 479 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 PRKAR1AP10644 381 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 PYCR1P32322 319 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 GALNSP34059 522 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 ACVR1BP36896 505 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 FNTBP49356 437 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 GZMKP49863 264 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 PGDP52209 483 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 HCCSP53701 268 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 KLHL26Q53HC5 615 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 TIGD3Q6B0B8 471 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 PLCZ1Q86YW0 608 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 C3orf49Q96BT1 292 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 ENAMQ9NRM1 1142 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 EXTL2Q9UBQ6 330 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 OR10H1Q9Y4A9 318 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 CLCA3PQ9Y6N3 262 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 SPTBP11277 2137 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 IGHV1OR15-9A0A0B4J2B8 117 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 LRRN3E7EW58 273 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 TRIM3O75382 744 aaPredicted RBP16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 NME1P15531 152 aaKnown RBP16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 OR10A3P58181 314 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 SMAD4Q13485 552 aaKnown RBP16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 ELOCQ15369 112 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 SF3A2Q15428 464 aaKnown RBP16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 ACSM3Q53FZ2 586 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 SFXN4Q6P4A7 337 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 DPY19L2P2Q6ZN68 376 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 LRRC28Q86X40 367 aaPredicted RBP16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 MS4A15Q8N5U1 240 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 POMGNT2Q8NAT1 580 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 OR51Q1Q8NH59 317 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 DEDD2Q8WXF8 326 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 SNAPC3Q92966 411 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 CITED4Q96RK1 184 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 LRRN3Q9H3W5 708 aa16.84■□□□□ 0.29
SEMA3B-209ENST00000456560 FAM240BA0A1B0GVZ2 78 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 LYRM1O43325 122 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 OR7A10O76100 309 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 OR2T7P0C7T2 308 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 P2RX3P56373 397 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 C19orf57Q0VDD7 668 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 BTBD16Q32M84 506 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 SYS1Q8N2H4 156 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 METTL27Q8N6F8 245 aaPredicted RBP16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 OR2T27Q8NH04 317 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 GHSRQ92847 366 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 NIPAL2Q9H841 368 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 PRDM6Q9NQX0 595 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 NLKQ9UBE8 527 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 RASD1Q9Y272 281 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 ADAM18Q9Y3Q7 739 aa16.83■□□□□ 0.28
SEMA3B-209ENST00000456560 KNL1Q8NG31 2342 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 A0A1W2PR77 199 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 ARPC3O15145 178 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 HYAL3O43820 417 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 C1QBP02746 253 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 EIF4EP06730 217 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 DIO1P49895 249 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 ISXQ2M1V0 245 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 TP53I3Q53FA7 332 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 C17orf82Q86X59 251 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF440Q8IYI8 595 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 NPEPL1Q8NDH3 523 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 FAM71CQ8NEG0 241 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 LMX1AQ8TE12 382 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNRF4Q8WWF5 429 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 HLA-CQ95604 372 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 CNN2Q99439 309 aaKnown RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC38A3Q99624 504 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 NMNAT2Q9BZQ4 307 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 SPRTNQ9H040 489 aaPredicted RBP16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 NRIP3Q9NQ35 241 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 ING3Q9NXR8 418 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF337Q9Y3M9 751 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 THADAQ6YHU6 1953 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 IGKV1D-42A0A075B6H8 117 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 A0A0X1KG70 313 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 FITM1A5D6W6 292 aa16.82■□□□□ 0.28
SEMA3B-209ENST00000456560 IFNA16P05015 189 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms