RNA–Protein interactions for RNA: ENST00000455999.5

UBE2F-219, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-219ENST00000455999 TUBA1BP68363 451 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 TUBA4AP68366 448 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 SLC35A1P78382 337 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 KCNJ10P78508 379 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 TGFBR3Q03167 851 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 ZSWIM7Q19AV6 140 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 BHLHB9Q6PI77 547 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 TUBA1AQ71U36 451 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 ZCCHC24Q8N2G6 241 aaKnown RBP12.89□□□□□ -0.35
UBE2F-219ENST00000455999 TMEM99Q8N816 258 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 ZIC4Q8N9L1 334 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 MNS1Q8NEH6 495 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 CNOT9Q92600 299 aaKnown RBP12.89□□□□□ -0.35
UBE2F-219ENST00000455999 ROPN1LQ96C74 230 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 SLC38A2Q96QD8 506 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
UBE2F-219ENST00000455999 EXD2Q9NVH0 621 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
UBE2F-219ENST00000455999 TMEFF2Q9UIK5 374 aaPredicted RBP12.89□□□□□ -0.35
UBE2F-219ENST00000455999 B9A039 149 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 NR5A2O00482 541 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 NPHS1O60500 1241 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 LILRA1O75019 489 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 AKR7A3O95154 331 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 LGI1O95970 557 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 OR4A8P0C604 315 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 TACR3P29371 465 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 CALCRP30988 508 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
UBE2F-219ENST00000455999 TRIP10Q15642 601 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 TBRG1Q3YBR2 411 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 OTUD3Q5T2D3 398 aaPredicted RBP12.88□□□□□ -0.35
UBE2F-219ENST00000455999 C12orf54Q6X4T0 127 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 AAED1Q7RTV5 226 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 ANKRD46Q86W74 232 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 IFT20Q8IY31 132 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 ARFGAP2Q8N6H7 521 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 OR9K2Q8NGE7 335 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 OR4A15Q8NGL6 344 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 TMEM45BQ96B21 275 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 AURKBQ96GD4 344 aaPredicted RBP12.88□□□□□ -0.35
UBE2F-219ENST00000455999 SNX18Q96RF0 628 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 NAA11Q9BSU3 229 aaPredicted RBP12.88□□□□□ -0.35
UBE2F-219ENST00000455999 SAP130Q9H0E3 1048 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 PLK3Q9H4B4 646 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 ZDHHC2Q9UIJ5 367 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 MID2Q9UJV3 735 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 PCDHGB4Q9UN71 923 aa12.88□□□□□ -0.35
UBE2F-219ENST00000455999 EIF1BO60739 113 aaKnown RBP12.87□□□□□ -0.35
UBE2F-219ENST00000455999 VENTXO95231 258 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 CPSF4O95639 269 aaKnown RBP12.87□□□□□ -0.35
UBE2F-219ENST00000455999 CECR9P0C854 216 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 APEX1P27695 318 aaKnown RBP12.87□□□□□ -0.35
UBE2F-219ENST00000455999 CLDN8P56748 225 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 NAAAQ02083 359 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 CEACAM7Q14002 265 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 EFNB3Q15768 340 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 AP1ARQ63HQ0 302 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 PAQR6Q6TCH4 344 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 LINGO2Q7L985 606 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 MYPOPQ86VE0 399 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-219ENST00000455999 ZNF540Q8NDQ6 660 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 OR1K1Q8NGR3 316 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 MIPOL1Q8TD10 442 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 TUBGCP3Q96CW5 907 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 DDIT4LQ96D03 193 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 KCNS3Q9BQ31 491 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 RHOXF2Q9BQY4 288 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 RAB1BQ9H0U4 201 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 EXOSC3Q9NQT5 275 aaKnown RBP12.87□□□□□ -0.35
UBE2F-219ENST00000455999 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.87□□□□□ -0.35
UBE2F-219ENST00000455999 SLC17A7Q9P2U7 560 aa12.87□□□□□ -0.35
UBE2F-219ENST00000455999 TENM1Q9UKZ4 2725 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 LYNX1G3V0Z9 82 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 ZNF208O43345 1280 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 SCN2BO60939 215 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 PDE5AO76074 875 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 CRYAAP02489 173 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 IGFBP1P08833 259 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-219ENST00000455999 CELA3BP08861 270 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 TACSTD2P09758 323 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 LYNX1P0DP58 116 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 DAOP14920 347 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 FKBP2P26885 142 aaKnown RBP12.86□□□□□ -0.35
UBE2F-219ENST00000455999 GIFP27352 417 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 SELENOPP49908 381 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 PPOXP50336 477 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 IDH3GP51553 393 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-219ENST00000455999 POLR2HP52434 150 aaKnown RBP12.86□□□□□ -0.35
UBE2F-219ENST00000455999 CHN2P52757 468 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 HGFACQ04756 655 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 OR7A5Q15622 319 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 GPAT3Q53EU6 434 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 ATAD3BQ5T9A4 648 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 ANKRD16Q6P6B7 361 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 RINLQ6ZS11 566 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 LINC01356Q8N9X3 169 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 POMGNT2Q8NAT1 580 aa12.86□□□□□ -0.35
UBE2F-219ENST00000455999 UBLCP1Q8WVY7 318 aaPredicted RBP12.86□□□□□ -0.35
UBE2F-219ENST00000455999 BOD1Q96IK1 185 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms