RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 SUMO1P63165 101 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBPL2Q6SJ96 375 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GTF2H4Q92759 462 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NKD1Q969G9 470 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 PCED1BQ96HM7 432 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CDCA3Q99618 268 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ELP3Q9H9T3 547 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TUBG2Q9NRH3 451 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF701Q9NV72 531 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SLC7A7Q9UM01 511 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GABRPO00591 440 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 WNT10BO00744 389 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 IGHG1P01857 330 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 AHCYP23526 432 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GNRHRP30968 328 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GATMP50440 423 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CAV2P51636 162 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 UBE2UQ5VVX9 321 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 BTNL8Q6UX41 500 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ASPGQ86U10 573 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 C3orf58Q8NDZ4 430 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR14A16Q8NHC5 309 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HAS2Q92819 552 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 LRRC3BQ96PB8 259 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 DDOQ99489 341 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 KCNK15Q9H427 330 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 UBQLN4Q9NRR5 601 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NSG2Q9Y328 171 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NAGAP17050 411 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NMBRP28336 390 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM62Q0P6H9 643 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 PMS2P3Q13401 168 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF805Q5CZA5 627 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RNF165Q6ZSG1 346 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RCBTB1Q8NDN9 531 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR6N1Q8NGY5 312 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 EDARADDQ8WWZ3 215 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RBPMSQ93062 196 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NTNG2Q96CW9 530 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ASF1BQ9NVP2 202 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3DA0A087WVF3 549 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3IA0A087WXS9 549 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3EA0A087X179 549 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 KIR2DS5A0A0G2JLQ3 304 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 A0A0G2JNG1 304 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 KIR2DS3K7RE56 304 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GPR171O14626 319 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TPOP07202 933 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3HP0C7X1 549 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CEBPBP17676 345 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HIST1H3AP68431 136 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 KIR2DS5Q14953 304 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GPR157Q5UAW9 335 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 CES4AQ5XG92 561 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 EEF1DP3Q658K8 133 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3CQ6IPX1 549 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 Q8IYB0 196 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 TBC1D3Q8IZP1 549 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SLC22A24Q8N4F4 322 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR51A4Q8NGJ6 313 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR5M3Q8NGP4 307 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 EMG1Q92979 244 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR51I1Q9H343 314 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 DLL4Q9NR61 685 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 LIN7CQ9NUP9 197 aaKnown RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 IL36AQ9UHA7 158 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 MUC4Q99102 2169 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF831Q5JPB2 1677 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 J3QLW9 94 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 DUX1O43812 170 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 KNG1P01042 644 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HLA-DQB2P05538 268 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF19P17023 458 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HTR1FP30939 366 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ELOCQ15369 112 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RAP1GAP2Q684P5 730 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 FCRL6Q6DN72 434 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 WDR74Q6RFH5 385 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 PAQR3Q6TCH7 311 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 LIPIQ6XZB0 460 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HLA-CQ95604 372 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ZPBPQ9BS86 351 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SERPINE3A8MV23 424 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 PLATP00750 562 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 AK4P27144 223 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 OR4D2P58180 307 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RAC1P63000 192 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 ARHGAP40Q5TG30 622 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HFE2Q6ZVN8 426 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SLC15A4Q8N697 577 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SLC6A18Q96N87 628 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 FEVQ99581 238 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 NDFIP1Q9BT67 221 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 HCAR1Q9BXC0 346 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SLC12A9Q9BXP2 914 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 RIMS3Q9UJD0 308 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 GPR55Q9Y2T6 319 aaPredicted RBP4.89□□□□□ -1.63
CSMD3-204ENST00000455883 A6NDN8 102 aa4.89□□□□□ -1.63
CSMD3-204ENST00000455883 SCGB1D2O95969 90 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms