RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CDK6Q00534 326 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 BNIP2Q12982 314 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 CEACAM7Q14002 265 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 STK11Q15831 433 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 SHEQ5VZ18 495 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 REEP3Q6NUK4 255 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 LSRQ86X29 649 aaPredicted RBP18.76■□□□□ 0.59
HMGB3-205ENST00000455596 LRRC75A-AS1Q8N1F1 130 aa18.76■□□□□ 0.59
HMGB3-205ENST00000455596 ESRP2Q9H6T0 727 aaKnown RBP18.76■□□□□ 0.59
HMGB3-205ENST00000455596 LEF1Q9UJU2 399 aaPredicted RBP18.76■□□□□ 0.59
HMGB3-205ENST00000455596 A8MVM7 634 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 IGHV3-9P01782 118 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 PRKAR1BP31321 381 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 OR7A5Q15622 319 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 NCMAPQ5T1S8 102 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 OTUD3Q5T2D3 398 aaPredicted RBP18.75■□□□□ 0.59
HMGB3-205ENST00000455596 KRT73Q86Y46 540 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 P3H2Q8IVL5 708 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 C10orf111Q8N326 155 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 WFDC11Q8NEX6 87 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 C3orf49Q96BT1 292 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 SPATA5L1Q9BVQ7 753 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 TAPBPLQ9BX59 468 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 TMEM38AQ9H6F2 299 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 SLC9A8Q9Y2E8 581 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 FLVCR1Q9Y5Y0 555 aa18.75■□□□□ 0.59
HMGB3-205ENST00000455596 LIPT2A6NK58 231 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 HS3ST1O14792 307 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 ARHGEF9O43307 516 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 FRS3O43559 492 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 CD3EP07766 207 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 GGT1P19440 569 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 ADSLP30566 484 aaPredicted RBP18.74■□□□□ 0.59
HMGB3-205ENST00000455596 NTF4P34130 210 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 RIPPLY3P57055 190 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 SLC17A1Q14916 467 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 PPA1Q15181 289 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 TIMM23BQ5SRD1 257 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 CASP12Q6UXS9 341 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 DLEU7Q6UYE1 221 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 SSX8Q7RTT4 187 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 P2RY8Q86VZ1 359 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 ZNF433Q8N7K0 673 aaPredicted RBP18.74■□□□□ 0.59
HMGB3-205ENST00000455596 TMEM99Q8N816 258 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 MUCL1Q96DR8 90 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 CPPED1Q9BRF8 314 aaPredicted RBP18.74■□□□□ 0.59
HMGB3-205ENST00000455596 IKZF5Q9H5V7 419 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 ZNF385DQ9H6B1 395 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 PARPBPQ9NWS1 579 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 ASB6Q9NWX5 421 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 NDUFAF1Q9Y375 327 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 RNF115Q9Y4L5 304 aa18.74■□□□□ 0.59
HMGB3-205ENST00000455596 A0A0G2JND7 137 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 ANGPT2O15123 496 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 AKR7A3O95154 331 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 SLC6A2P23975 617 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 HOXC5Q00444 222 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 SCARB2Q14108 478 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 RUNDC3AQ59EK9 446 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 C1orf140Q5VVS0 124 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 DHDDSQ86SQ9 333 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 ATG4DQ86TL0 474 aaPredicted RBP18.73■□□□□ 0.59
HMGB3-205ENST00000455596 KRTAP1-3Q8IUG1 177 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 STK35Q8TDR2 534 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 AKAP1Q92667 903 aaKnown RBP eCLIP18.73■□□□□ 0.59
HMGB3-205ENST00000455596 SF3B5Q9BWJ5 86 aaKnown RBP18.73■□□□□ 0.59
HMGB3-205ENST00000455596 RPS6KB2Q9UBS0 482 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 MALT1Q9UDY8 824 aa18.73■□□□□ 0.59
HMGB3-205ENST00000455596 CIB4A0PJX0 185 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 OR5H1A6NKK0 313 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 AQP7P3A6NL99 342 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 CCT8L1PA6NM43 557 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 TMEM229AB2RXF0 380 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 RAD51DO75771 328 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 FOSL1P15407 271 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 FAPQ12884 760 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 METTL21CQ5VZV1 264 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 ADAM5Q6NVV9 412 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 DHRS4L2Q6PKH6 230 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 SEZ6L2Q6UXD5 910 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 DPP10Q8N608 796 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 ZNF611Q8N823 705 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 TSPEARQ8WU66 669 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 ZNF607Q96SK3 696 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 DLL4Q9NR61 685 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 ADPRHL2Q9NX46 363 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 TAS2R16Q9NYV7 291 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 UPB1Q9UBR1 384 aa18.72■□□□□ 0.59
HMGB3-205ENST00000455596 PRORSD1PA6NEY8 169 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 ELOA3DA6NLF2 546 aaPredicted RBP18.71■□□□□ 0.59
HMGB3-205ENST00000455596 CLOCKO15516 846 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 NPIPB7O75200 414 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 AHSA1O95433 338 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 ELOA3BQ3SY89 546 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 Q5PR19 223 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 TMEM225Q6GV28 225 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 HIPK4Q8NE63 616 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 BHLHE22Q8NFJ8 381 aaPredicted RBP18.71■□□□□ 0.59
HMGB3-205ENST00000455596 ELOA3Q8NG57 546 aa18.71■□□□□ 0.59
HMGB3-205ENST00000455596 OR9K2Q8NGE7 335 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms