RNA–Protein interactions for RNA: ENST00000452111.5

CTNS-204, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 617 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-204ENST00000452111 REEP3Q6NUK4 255 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 PAQR6Q6TCH4 344 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 CASP12Q6UXS9 341 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 DHDDSQ86SQ9 333 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 HSD17B8Q92506 261 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 C3orf49Q96BT1 292 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 TMEM120AQ9BXJ8 343 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 GMEB1Q9Y692 573 aa15.86■□□□□ 0.13
CTNS-204ENST00000452111 LIPT2A6NK58 231 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 A8MVM7 634 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 MRPL33O75394 65 aaKnown RBP15.85■□□□□ 0.13
CTNS-204ENST00000452111 AKR7A3O95154 331 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 CNOT4O95628 575 aaKnown RBP15.85■□□□□ 0.13
CTNS-204ENST00000452111 GPIP06744 558 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 GPX2P18283 190 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 COX5AP20674 150 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 SLC6A2P23975 617 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 PRKAR1BP31321 381 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 SF3A3Q12874 501 aaKnown RBP eCLIP15.85■□□□□ 0.13
CTNS-204ENST00000452111 FOXD4Q12950 439 aaPredicted RBP15.85■□□□□ 0.13
CTNS-204ENST00000452111 FBXW9Q5XUX1 488 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 C20orf204Q6ZNR8 217 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 ATG4DQ86TL0 474 aaPredicted RBP15.85■□□□□ 0.13
CTNS-204ENST00000452111 RETREG3Q86VR2 466 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 COMTD1Q86VU5 262 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 KRT73Q86Y46 540 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 TMEM99Q8N816 258 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 WFDC11Q8NEX6 87 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 PIGTQ969N2 578 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 TMUB1Q9BVT8 246 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 TAPBPLQ9BX59 468 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 RSPO3Q9BXY4 272 aaPredicted RBP15.85■□□□□ 0.13
CTNS-204ENST00000452111 TMEM38AQ9H6F2 299 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 ADPRHL2Q9NX46 363 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 FREM1Q5H8C1 2179 aa15.85■□□□□ 0.13
CTNS-204ENST00000452111 CLOCKO15516 846 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 SMPD2O60906 423 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 RAD51DO75771 328 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 GGT1P19440 569 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 MTPNP58546 118 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 SLC17A1Q14916 467 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 ADRM1Q16186 407 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 GLIPR1L2Q4G1C9 344 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 RUNDC3AQ59EK9 446 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 SLC35B4Q969S0 331 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 USB1Q9BQ65 265 aaKnown RBP15.84■□□□□ 0.13
CTNS-204ENST00000452111 TMEM204Q9BSN7 226 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 SPATA5L1Q9BVQ7 753 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 NGBQ9NPG2 151 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 FGFR1OP2Q9NVK5 253 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 RPS6KB2Q9UBS0 482 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 PRDM4Q9UKN5 801 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 SLC9A8Q9Y2E8 581 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 FLVCR1Q9Y5Y0 555 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 MAP1AP78559 2803 aaPredicted RBP15.84■□□□□ 0.13
CTNS-204ENST00000452111 MTORP42345 2549 aa15.84■□□□□ 0.13
CTNS-204ENST00000452111 MED13LQ71F56 2210 aa15.83■□□□□ 0.13
CTNS-204ENST00000452111 CIB4A0PJX0 185 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 TMEM229AB2RXF0 380 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 TPST1O60507 370 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 TROVE2P10155 538 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTNS-204ENST00000452111 HTR2AP28223 471 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 NKX6-1P78426 367 aaPredicted RBP15.83■□□□□ 0.12
CTNS-204ENST00000452111 FAPQ12884 760 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 NFYCQ13952 458 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 SELPLGQ14242 412 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 CYP51A1Q16850 503 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 C1orf140Q5VVS0 124 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 DHRS4L2Q6PKH6 230 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 GPAT4Q86UL3 456 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 DPP10Q8N608 796 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 ZNF433Q8N7K0 673 aaPredicted RBP15.83■□□□□ 0.12
CTNS-204ENST00000452111 HIPK4Q8NE63 616 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 OR52E4Q8NGH9 312 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 AKAP1Q92667 903 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTNS-204ENST00000452111 ANKRD27Q96NW4 1050 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 CGREF1Q99674 301 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 ESRP2Q9H6T0 727 aaKnown RBP15.83■□□□□ 0.12
CTNS-204ENST00000452111 ASB6Q9NWX5 421 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 ANGPT4Q9Y264 503 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 RNF115Q9Y4L5 304 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 PRR14LQ5THK1 2151 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 ROS1P08922 2347 aa15.83■□□□□ 0.12
CTNS-204ENST00000452111 AQP7P3A6NL99 342 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 ELOA3DA6NLF2 546 aaPredicted RBP15.82■□□□□ 0.12
CTNS-204ENST00000452111 CCT8L1PA6NM43 557 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 NPIPB7O75200 414 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 AHSA1O95433 338 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 CD3EP07766 207 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 HOXC12P31275 282 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 NCALDP61601 193 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 PPA1Q15181 289 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 ELOA3BQ3SY89 546 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 TIMM23BQ5SRD1 257 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 NCMAPQ5T1S8 102 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 C9orf135Q5VTT2 229 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 METTL21CQ5VZV1 264 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 SEZ6L2Q6UXD5 910 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 KRTAP1-3Q8IUG1 177 aa15.82■□□□□ 0.12
CTNS-204ENST00000452111 P3H2Q8IVL5 708 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms