RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 PPP4R4Q6NUP7 873 aa21.55■■□□□ 1.04
CPSF4-207ENST00000451876 PIWIL3Q7Z3Z3 882 aaKnown RBP21.55■■□□□ 1.04
CPSF4-207ENST00000451876 PIK3C3Q8NEB9 887 aa21.55■■□□□ 1.04
CPSF4-207ENST00000451876 PIP5K1AQ99755 562 aa21.55■■□□□ 1.04
CPSF4-207ENST00000451876 VKORC1Q9BQB6 163 aa21.55■■□□□ 1.04
CPSF4-207ENST00000451876 TESMINQ9Y4I5 508 aa21.55■■□□□ 1.04
CPSF4-207ENST00000451876 TENM4Q6N022 2769 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 PCNX1Q96RV3 2341 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 KPNA4O00629 521 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 TOXO94900 526 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 PMS2P2O95744 297 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 GPIP06744 558 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 RAP2AP10114 183 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 UGT2B15P54855 530 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 RAC3P60763 192 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 POP5Q969H6 163 aaKnown RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 CPNE4Q96A23 557 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 SLCO4A1Q96BD0 722 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 UCN2Q96RP3 112 aa21.54■■□□□ 1.04
CPSF4-207ENST00000451876 MEPEQ9NQ76 525 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 PAQR5Q9NXK6 330 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 DIDO1Q9BTC0 2240 aaKnown RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 NCOA6Q14686 2063 aaPredicted RBP21.54■■□□□ 1.04
CPSF4-207ENST00000451876 IGHV3-15A0A0B4J1V0 119 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 CD8B2A6NJW9 211 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 SLC22A20A6NK97 555 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 AQP8O94778 261 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 AHSA1O95433 338 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 HOXD4P09016 255 aaPredicted RBP21.53■■□□□ 1.04
CPSF4-207ENST00000451876 GLI4P10075 376 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 UMPSP11172 480 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 NQO1P15559 274 aaKnown RBP21.53■■□□□ 1.04
CPSF4-207ENST00000451876 IFNA8P32881 189 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 OR7A5Q15622 319 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 C4orf17Q53FE4 359 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 TTC33Q6PID6 262 aaPredicted RBP21.53■■□□□ 1.04
CPSF4-207ENST00000451876 C9orf106Q8NAJ2 232 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 ROBO4Q8WZ75 1007 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 TAAR8Q969N4 342 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 CALHM2Q9HA72 323 aa21.53■■□□□ 1.04
CPSF4-207ENST00000451876 MBD3L4A6NDZ8 208 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 MBD3L3A6NE82 208 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 MBD3L5A6NJ08 208 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 LIPT2A6NK58 231 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 ANKRD65E5RJM6 399 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 FTCDNL1E5RQL4 147 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 LRRN3E7EW58 273 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 SMAD9O15198 467 aaKnown RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 H1F0P07305 194 aaKnown RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 FPR1P21462 350 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 ENPP1P22413 925 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 NUP107P57740 925 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 CSNK2A1P68400 391 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 TRAM2Q15035 370 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 SF3B4Q15427 424 aaKnown RBP eCLIP21.52■■□□□ 1.043e-7■■■■■ 27.6
CPSF4-207ENST00000451876 PFN4Q8NHR9 129 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 MBD3L2Q8NHZ7 208 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 TMEM239Q8WW34 195 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 RSRC1Q96IZ7 334 aaKnown RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 DHRS1Q96LJ7 313 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 CHID1Q9BWS9 393 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 ERRFI1Q9UJM3 462 aaPredicted RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 TRAPPC4Q9Y296 219 aa21.52■■□□□ 1.04
CPSF4-207ENST00000451876 HELZ2Q9BYK8 2649 aaKnown RBP21.52■■□□□ 1.04
CPSF4-207ENST00000451876 TRAV36DV7A0A075B6V5 113 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 A0A1B0GUH1 482 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 ZNF814B7Z6K7 855 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 PIP5K1CO60331 668 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 RRM2P31350 389 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 RBM34P42696 430 aaKnown RBP21.51■■□□□ 1.03
CPSF4-207ENST00000451876 OR2B6P58173 313 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 SPIBQ01892 262 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 PMPCAQ10713 525 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 KPNB1Q14974 876 aaKnown RBP21.51■■□□□ 1.03
CPSF4-207ENST00000451876 C5orf46Q6UWT4 87 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 NAXEQ8NCW5 288 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 OR52J3Q8NH60 311 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 SLC7A13Q8TCU3 470 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 RAB3IPQ96QF0 476 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-207ENST00000451876 TIGARQ9NQ88 270 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 C20orf141Q9NUB4 165 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 CCM2LQ9NUG4 571 aaPredicted RBP21.51■■□□□ 1.03
CPSF4-207ENST00000451876 MCTS1Q9ULC4 181 aaKnown RBP21.51■■□□□ 1.03
CPSF4-207ENST00000451876 ZNF175Q9Y473 711 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 A0A1W2PRQ8 180 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 LTBQ06643 244 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 DGCR6Q14129 220 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 FGD3Q5JSP0 725 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 FAM69AQ5T7M9 428 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 WNT2BQ93097 391 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 SLC25A36Q96CQ1 311 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 CCDC120Q96HB5 630 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 MOGAT1Q96PD6 335 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 ZNF347Q96SE7 839 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 EPYCQ99645 322 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 SEC14L4Q9UDX3 406 aa21.51■■□□□ 1.03
CPSF4-207ENST00000451876 A0A087WUU8 490 aa21.5■■□□□ 1.03
CPSF4-207ENST00000451876 TRBV4-1A0A0J9YWV2 114 aa21.5■■□□□ 1.03
CPSF4-207ENST00000451876 RAMP1O60894 148 aa21.5■■□□□ 1.03
CPSF4-207ENST00000451876 SYNGR4O95473 234 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms